Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GMDSO60547 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.22■□□□□ 0.19
GMDSO60547 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GMDSO60547 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.22■□□□□ 0.19
GMDSO60547 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
GMDSO60547 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
GMDSO60547 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
GMDSO60547 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
GMDSO60547 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.22■□□□□ 0.19
GMDSO60547 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
GMDSO60547 PCDHA12-202ENST00000613593 2588 ntBASIC16.22■□□□□ 0.19
GMDSO60547 AC073592.3-201ENST00000625118 1834 ntBASIC16.22■□□□□ 0.19
GMDSO60547 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.21■□□□□ 0.19
GMDSO60547 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
GMDSO60547 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.21■□□□□ 0.19
GMDSO60547 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.21■□□□□ 0.19
GMDSO60547 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.21■□□□□ 0.19
GMDSO60547 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
GMDSO60547 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
GMDSO60547 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.21■□□□□ 0.19
GMDSO60547 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
GMDSO60547 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
GMDSO60547 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.21■□□□□ 0.19
GMDSO60547 AP003071.4-201ENST00000562276 1284 ntBASIC16.21■□□□□ 0.19
GMDSO60547 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.21■□□□□ 0.19
GMDSO60547 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
GMDSO60547 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.21■□□□□ 0.19
GMDSO60547 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.21■□□□□ 0.19
GMDSO60547 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GMDSO60547 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GMDSO60547 AC134043.2-201ENST00000624206 2238 ntBASIC16.21■□□□□ 0.18
GMDSO60547 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
GMDSO60547 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
GMDSO60547 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.2■□□□□ 0.18
GMDSO60547 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.2■□□□□ 0.18
GMDSO60547 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GMDSO60547 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.2■□□□□ 0.18
GMDSO60547 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GMDSO60547 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GMDSO60547 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GMDSO60547 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.2■□□□□ 0.18
GMDSO60547 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GMDSO60547 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.2■□□□□ 0.18
GMDSO60547 AC008040.2-201ENST00000461049 708 ntBASIC16.2■□□□□ 0.18
GMDSO60547 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.2■□□□□ 0.18
GMDSO60547 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
GMDSO60547 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.2■□□□□ 0.18
GMDSO60547 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.2■□□□□ 0.18
GMDSO60547 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.2■□□□□ 0.18
GMDSO60547 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.2■□□□□ 0.18
GMDSO60547 REXO1L10P-201ENST00000615707 1290 ntBASIC16.2■□□□□ 0.18
GMDSO60547 REXO1L12P-201ENST00000622156 912 ntBASIC16.2■□□□□ 0.18
GMDSO60547 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.2■□□□□ 0.18
GMDSO60547 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
GMDSO60547 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GMDSO60547 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.2■□□□□ 0.18
GMDSO60547 AL162741.1-201ENST00000565563 1558 ntBASIC16.2■□□□□ 0.18
GMDSO60547 HEIH-201ENST00000623091 1652 ntBASIC16.2■□□□□ 0.18
GMDSO60547 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GMDSO60547 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GMDSO60547 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.19■□□□□ 0.18
GMDSO60547 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
GMDSO60547 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
GMDSO60547 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.19■□□□□ 0.18
GMDSO60547 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.19■□□□□ 0.18
GMDSO60547 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GMDSO60547 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
GMDSO60547 AC096733.2-201ENST00000609937 1394 ntBASIC16.19■□□□□ 0.18
GMDSO60547 UNC93B2-201ENST00000285383 730 ntBASIC16.19■□□□□ 0.18
GMDSO60547 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms