Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2AO43633 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2AO43633 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2AO43633 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHMP2AO43633 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2AO43633 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2AO43633 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP2AO43633 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHMP2AO43633 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2AO43633 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2AO43633 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2AO43633 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2AO43633 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2AO43633 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2AO43633 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CHMP2AO43633 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CHMP2AO43633 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP2AO43633 BX276092.5-203ENST00000456199 560 ntBASIC20.53■□□□□ 0.88
CHMP2AO43633 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
CHMP2AO43633 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP2AO43633 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2AO43633 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP2AO43633 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP2AO43633 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.53■□□□□ 0.88
CHMP2AO43633 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.53■□□□□ 0.88
CHMP2AO43633 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP2AO43633 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CHMP2AO43633 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2AO43633 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
CHMP2AO43633 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP2AO43633 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP2AO43633 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2AO43633 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2AO43633 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.53■□□□□ 0.88
CHMP2AO43633 AC073592.3-201ENST00000625118 1834 ntBASIC20.53■□□□□ 0.88
CHMP2AO43633 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP2AO43633 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CHMP2AO43633 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2AO43633 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.52■□□□□ 0.88
CHMP2AO43633 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2AO43633 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.52■□□□□ 0.88
CHMP2AO43633 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.52■□□□□ 0.88
CHMP2AO43633 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.52■□□□□ 0.88
CHMP2AO43633 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
CHMP2AO43633 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2AO43633 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2AO43633 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2AO43633 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2AO43633 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2AO43633 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.52■□□□□ 0.88
CHMP2AO43633 IGHGP-201ENST00000390555 1178 ntBASIC20.52■□□□□ 0.88
CHMP2AO43633 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2AO43633 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2AO43633 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.52■□□□□ 0.88
CHMP2AO43633 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2AO43633 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.52■□□□□ 0.88
CHMP2AO43633 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.52■□□□□ 0.88
CHMP2AO43633 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.52■□□□□ 0.88
CHMP2AO43633 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.52■□□□□ 0.88
CHMP2AO43633 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CHMP2AO43633 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2AO43633 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.52■□□□□ 0.88
CHMP2AO43633 GPR32P1-201ENST00000601788 811 ntBASIC20.52■□□□□ 0.88
CHMP2AO43633 AL390719.2-201ENST00000606993 987 ntBASIC20.52■□□□□ 0.88
CHMP2AO43633 AL121672.3-201ENST00000608644 468 ntBASIC20.52■□□□□ 0.88
CHMP2AO43633 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.52■□□□□ 0.88
CHMP2AO43633 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CHMP2AO43633 AL138781.2-201ENST00000617896 1843 ntBASIC20.52■□□□□ 0.88
CHMP2AO43633 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
CHMP2AO43633 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2AO43633 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP2AO43633 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.52■□□□□ 0.87
CHMP2AO43633 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.52■□□□□ 0.87
CHMP2AO43633 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CHMP2AO43633 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 ESPNP-201ENST00000270691 2015 ntBASIC20.51■□□□□ 0.87
CHMP2AO43633 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 AC016734.2-201ENST00000624325 1377 ntBASIC20.51■□□□□ 0.87
CHMP2AO43633 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CHMP2AO43633 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.51■□□□□ 0.87
CHMP2AO43633 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.51■□□□□ 0.87
CHMP2AO43633 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.51■□□□□ 0.87
CHMP2AO43633 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CHMP2AO43633 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP2AO43633 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms