Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 LINC00602-201ENST00000629776 2065 ntBASIC19.53■□□□□ 0.72
HOXA2O43364 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXA2O43364 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA2O43364 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA2O43364 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA2O43364 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA2O43364 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXA2O43364 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.53■□□□□ 0.72
HOXA2O43364 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXA2O43364 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA2O43364 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HOXA2O43364 AC011467.2-201ENST00000598425 242 ntBASIC19.53■□□□□ 0.72
HOXA2O43364 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXA2O43364 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXA2O43364 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA2O43364 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA2O43364 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA2O43364 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA2O43364 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXA2O43364 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA2O43364 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXA2O43364 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HOXA2O43364 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXA2O43364 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXA2O43364 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA2O43364 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXA2O43364 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA2O43364 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXA2O43364 AC125634.1-201ENST00000438758 1403 ntBASIC19.52■□□□□ 0.72
HOXA2O43364 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA2O43364 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA2O43364 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXA2O43364 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
HOXA2O43364 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA2O43364 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HOXA2O43364 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA2O43364 RPS2P28-201ENST00000314255 741 ntBASIC19.52■□□□□ 0.72
HOXA2O43364 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.52■□□□□ 0.72
HOXA2O43364 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXA2O43364 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.52■□□□□ 0.72
HOXA2O43364 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXA2O43364 MTDHP3-201ENST00000594186 672 ntBASIC19.52■□□□□ 0.72
HOXA2O43364 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXA2O43364 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXA2O43364 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXA2O43364 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.52■□□□□ 0.72
HOXA2O43364 INTS4P1-201ENST00000438455 1935 ntBASIC19.52■□□□□ 0.72
HOXA2O43364 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.52■□□□□ 0.72
HOXA2O43364 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA2O43364 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA2O43364 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA2O43364 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA2O43364 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXA2O43364 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HOXA2O43364 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.52■□□□□ 0.71
HOXA2O43364 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
HOXA2O43364 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
HOXA2O43364 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HOXA2O43364 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXA2O43364 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
HOXA2O43364 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXA2O43364 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
HOXA2O43364 AC018712.1-201ENST00000455767 687 ntBASIC19.51■□□□□ 0.71
HOXA2O43364 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.51■□□□□ 0.71
HOXA2O43364 FGFR3P6-201ENST00000457012 610 ntBASIC19.51■□□□□ 0.71
HOXA2O43364 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.51■□□□□ 0.71
HOXA2O43364 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.51■□□□□ 0.71
HOXA2O43364 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.51■□□□□ 0.71
HOXA2O43364 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.51■□□□□ 0.71
HOXA2O43364 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXA2O43364 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXA2O43364 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.51■□□□□ 0.71
HOXA2O43364 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.51■□□□□ 0.71
HOXA2O43364 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXA2O43364 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXA2O43364 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXA2O43364 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXA2O43364 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXA2O43364 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
HOXA2O43364 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.5■□□□□ 0.71
HOXA2O43364 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXA2O43364 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.5■□□□□ 0.71
HOXA2O43364 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXA2O43364 RNPS1P1-201ENST00000507437 918 ntBASIC19.5■□□□□ 0.71
HOXA2O43364 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.5■□□□□ 0.71
HOXA2O43364 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.5■□□□□ 0.71
HOXA2O43364 AC006538.3-201ENST00000612495 578 ntBASIC19.5■□□□□ 0.71
HOXA2O43364 AF228730.7-201ENST00000641842 219 ntBASIC19.5■□□□□ 0.71
HOXA2O43364 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXA2O43364 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXA2O43364 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXA2O43364 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXA2O43364 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXA2O43364 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.5■□□□□ 0.71
HOXA2O43364 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.5■□□□□ 0.71
HOXA2O43364 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.5■□□□□ 0.71
HOXA2O43364 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HOXA2O43364 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.49■□□□□ 0.71
HOXA2O43364 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.49■□□□□ 0.71
HOXA2O43364 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms