Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 SLC25A1P1-201ENST00000528351 927 ntBASIC23■■□□□ 1.27
NPHP1O15259 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC23■■□□□ 1.27
NPHP1O15259 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
NPHP1O15259 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPHP1O15259 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC23■■□□□ 1.27
NPHP1O15259 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC23■■□□□ 1.27
NPHP1O15259 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
NPHP1O15259 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC23■■□□□ 1.27
NPHP1O15259 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23■■□□□ 1.27
NPHP1O15259 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPHP1O15259 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23■■□□□ 1.27
NPHP1O15259 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23■■□□□ 1.27
NPHP1O15259 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
NPHP1O15259 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NPHP1O15259 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NPHP1O15259 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPHP1O15259 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NPHP1O15259 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPHP1O15259 AC125437.2-201ENST00000625180 2167 ntBASIC22.99■■□□□ 1.27
NPHP1O15259 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
NPHP1O15259 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC22.99■■□□□ 1.27
NPHP1O15259 MIR940-201ENST00000401276 94 ntBASIC22.99■■□□□ 1.27
NPHP1O15259 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
NPHP1O15259 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22.99■■□□□ 1.27
NPHP1O15259 KRT18P58-201ENST00000527480 1120 ntBASIC22.99■■□□□ 1.27
NPHP1O15259 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC22.99■■□□□ 1.27
NPHP1O15259 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
NPHP1O15259 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.99■■□□□ 1.27
NPHP1O15259 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC22.99■■□□□ 1.27
NPHP1O15259 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPHP1O15259 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
NPHP1O15259 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
NPHP1O15259 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPHP1O15259 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC22.98■■□□□ 1.27
NPHP1O15259 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.98■■□□□ 1.27
NPHP1O15259 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
NPHP1O15259 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPHP1O15259 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPHP1O15259 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPHP1O15259 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC22.98■■□□□ 1.27
NPHP1O15259 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC22.98■■□□□ 1.27
NPHP1O15259 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC22.98■■□□□ 1.27
NPHP1O15259 AC132008.2-207ENST00000454517 770 ntBASIC22.98■■□□□ 1.27
NPHP1O15259 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC22.98■■□□□ 1.27
NPHP1O15259 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NPHP1O15259 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC22.98■■□□□ 1.27
NPHP1O15259 AC114341.1-201ENST00000618070 349 ntBASIC22.98■■□□□ 1.27
NPHP1O15259 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPHP1O15259 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
NPHP1O15259 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC22.98■■□□□ 1.27
NPHP1O15259 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPHP1O15259 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPHP1O15259 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPHP1O15259 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
NPHP1O15259 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPHP1O15259 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPHP1O15259 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
NPHP1O15259 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NPHP1O15259 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPHP1O15259 AC099343.3-201ENST00000605834 2503 ntBASIC22.98■■□□□ 1.27
NPHP1O15259 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.97■■□□□ 1.27
NPHP1O15259 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
NPHP1O15259 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
NPHP1O15259 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.97■■□□□ 1.27
NPHP1O15259 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC22.97■■□□□ 1.27
NPHP1O15259 HIST2H3DP1-201ENST00000401004 416 ntBASIC22.97■■□□□ 1.27
NPHP1O15259 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 AC073648.2-201ENST00000510116 352 ntBASIC22.97■■□□□ 1.27
NPHP1O15259 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC22.97■■□□□ 1.27
NPHP1O15259 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC22.97■■□□□ 1.27
NPHP1O15259 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC22.97■■□□□ 1.27
NPHP1O15259 AC148477.8-201ENST00000624298 468 ntBASIC22.97■■□□□ 1.27
NPHP1O15259 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
NPHP1O15259 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 AL163051.1-201ENST00000569214 1512 ntBASIC22.97■■□□□ 1.27
NPHP1O15259 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
NPHP1O15259 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPHP1O15259 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
NPHP1O15259 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPHP1O15259 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NPHP1O15259 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPHP1O15259 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms