Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 DAD1-205ENST00000543337 501 ntTSL 3 BASIC31.13■■■□□ 2.57
CUX2O14529 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
CUX2O14529 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CUX2O14529 AC125634.1-201ENST00000438758 1403 ntBASIC31.12■■■□□ 2.57
CUX2O14529 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CUX2O14529 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CUX2O14529 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC31.12■■■□□ 2.57
CUX2O14529 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CUX2O14529 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC31.12■■■□□ 2.57
CUX2O14529 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC31.12■■■□□ 2.57
CUX2O14529 AC004461.1-201ENST00000412461 403 ntBASIC31.12■■■□□ 2.57
CUX2O14529 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC31.12■■■□□ 2.57
CUX2O14529 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CUX2O14529 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC31.12■■■□□ 2.57
CUX2O14529 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC31.12■■■□□ 2.57
CUX2O14529 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CUX2O14529 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
CUX2O14529 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
CUX2O14529 CYP51A1P1-201ENST00000492267 1507 ntBASIC31.11■■■□□ 2.57
CUX2O14529 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC31.11■■■□□ 2.57
CUX2O14529 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC31.11■■■□□ 2.57
CUX2O14529 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CUX2O14529 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC31.11■■■□□ 2.57
CUX2O14529 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC31.11■■■□□ 2.57
CUX2O14529 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
CUX2O14529 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC31.11■■■□□ 2.57
CUX2O14529 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC31.11■■■□□ 2.57
CUX2O14529 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC31.11■■■□□ 2.57
CUX2O14529 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CUX2O14529 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CUX2O14529 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CUX2O14529 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CUX2O14529 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC31.1■■■□□ 2.57
CUX2O14529 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC31.1■■■□□ 2.57
CUX2O14529 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
CUX2O14529 SLBP-205ENST00000488267 987 ntTSL 2 BASIC31.1■■■□□ 2.57
CUX2O14529 INGX-202ENST00000489074 768 ntBASIC31.1■■■□□ 2.57
CUX2O14529 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC31.1■■■□□ 2.57
CUX2O14529 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CUX2O14529 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CUX2O14529 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CUX2O14529 KATNBL1P6-202ENST00000562413 1466 ntBASIC31.1■■■□□ 2.57
CUX2O14529 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC31.1■■■□□ 2.57
CUX2O14529 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC31.1■■■□□ 2.57
CUX2O14529 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
CUX2O14529 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC31.09■■■□□ 2.57
CUX2O14529 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CUX2O14529 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CUX2O14529 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC31.09■■■□□ 2.57
CUX2O14529 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC31.09■■■□□ 2.57
CUX2O14529 COX11-202ENST00000571584 1108 ntTSL 2 BASIC31.09■■■□□ 2.57
CUX2O14529 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CUX2O14529 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC31.09■■■□□ 2.57
CUX2O14529 MED29-202ENST00000594368 1471 ntTSL 2 BASIC31.09■■■□□ 2.57
CUX2O14529 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC31.09■■■□□ 2.57
CUX2O14529 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CUX2O14529 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CUX2O14529 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC31.09■■■□□ 2.57
CUX2O14529 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC31.08■■■□□ 2.57
CUX2O14529 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
CUX2O14529 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CUX2O14529 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CUX2O14529 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CUX2O14529 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CUX2O14529 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC31.08■■■□□ 2.57
CUX2O14529 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC31.08■■■□□ 2.57
CUX2O14529 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CUX2O14529 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
CUX2O14529 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CUX2O14529 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CUX2O14529 Z82202.1-201ENST00000623446 1880 ntBASIC31.08■■■□□ 2.57
CUX2O14529 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC31.08■■■□□ 2.57
CUX2O14529 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CUX2O14529 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
CUX2O14529 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CUX2O14529 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CUX2O14529 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CUX2O14529 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC31.08■■■□□ 2.57
CUX2O14529 ATP5G2P4-201ENST00000442175 420 ntBASIC31.08■■■□□ 2.57
CUX2O14529 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC31.08■■■□□ 2.57
CUX2O14529 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC31.08■■■□□ 2.57
CUX2O14529 LINC00628-201ENST00000628516 1289 ntBASIC31.08■■■□□ 2.57
CUX2O14529 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC31.08■■■□□ 2.57
CUX2O14529 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CUX2O14529 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC31.07■■■□□ 2.56
CUX2O14529 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CUX2O14529 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CUX2O14529 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CUX2O14529 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.56
CUX2O14529 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CUX2O14529 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CUX2O14529 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC31.07■■■□□ 2.56
CUX2O14529 SLC25A6P5-201ENST00000435663 894 ntBASIC31.07■■■□□ 2.56
CUX2O14529 CRB3P1-201ENST00000449338 276 ntBASIC31.07■■■□□ 2.56
CUX2O14529 AC092902.6-201ENST00000641783 218 ntBASIC31.07■■■□□ 2.56
CUX2O14529 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CUX2O14529 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
CUX2O14529 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CUX2O14529 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC31.06■■■□□ 2.56
CUX2O14529 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms