Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RTCAO00442 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.47■□□□□ 0.39
RTCAO00442 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RTCAO00442 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTCAO00442 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTCAO00442 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RTCAO00442 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTCAO00442 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTCAO00442 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTCAO00442 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
RTCAO00442 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTCAO00442 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTCAO00442 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.46■□□□□ 0.39
RTCAO00442 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.46■□□□□ 0.39
RTCAO00442 AC117947.1-201ENST00000427448 529 ntBASIC17.46■□□□□ 0.39
RTCAO00442 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.46■□□□□ 0.39
RTCAO00442 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.46■□□□□ 0.39
RTCAO00442 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTCAO00442 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.46■□□□□ 0.39
RTCAO00442 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTCAO00442 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RTCAO00442 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.45■□□□□ 0.38
RTCAO00442 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 AL162741.1-201ENST00000565563 1558 ntBASIC17.45■□□□□ 0.38
RTCAO00442 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.45■□□□□ 0.38
RTCAO00442 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RTCAO00442 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RTCAO00442 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.45■□□□□ 0.38
RTCAO00442 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.45■□□□□ 0.38
RTCAO00442 BX664615.1-201ENST00000443558 458 ntBASIC17.45■□□□□ 0.38
RTCAO00442 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.45■□□□□ 0.38
RTCAO00442 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.45■□□□□ 0.38
RTCAO00442 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.45■□□□□ 0.38
RTCAO00442 AC006011.2-201ENST00000621313 1158 ntBASIC17.45■□□□□ 0.38
RTCAO00442 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 AC092865.7-201ENST00000641832 219 ntBASIC17.45■□□□□ 0.38
RTCAO00442 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RTCAO00442 LINC01126-201ENST00000623515 1646 ntBASIC17.45■□□□□ 0.38
RTCAO00442 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RTCAO00442 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.45■□□□□ 0.38
RTCAO00442 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.45■□□□□ 0.38
RTCAO00442 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTCAO00442 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RTCAO00442 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RTCAO00442 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 REXO1L9P-201ENST00000604264 2108 ntBASIC17.44■□□□□ 0.38
RTCAO00442 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.44■□□□□ 0.38
RTCAO00442 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RTCAO00442 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 YBX1P2-201ENST00000489612 999 ntBASIC17.44■□□□□ 0.38
RTCAO00442 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RTCAO00442 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.44■□□□□ 0.38
RTCAO00442 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.44■□□□□ 0.38
RTCAO00442 MIR3180-4-201ENST00000582223 153 ntBASIC17.44■□□□□ 0.38
RTCAO00442 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.44■□□□□ 0.38
RTCAO00442 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTCAO00442 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms