Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC024243.1-201ENST00000609234 778 ntBASIC17.96■□□□□ 0.47
CDC7O00311 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.96■□□□□ 0.47
CDC7O00311 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.96■□□□□ 0.47
CDC7O00311 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.96■□□□□ 0.47
CDC7O00311 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.96■□□□□ 0.47
CDC7O00311 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.96■□□□□ 0.47
CDC7O00311 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDC7O00311 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
CDC7O00311 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.95■□□□□ 0.46
CDC7O00311 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CDC7O00311 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CDC7O00311 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CDC7O00311 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.95■□□□□ 0.46
CDC7O00311 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.95■□□□□ 0.46
CDC7O00311 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.95■□□□□ 0.46
CDC7O00311 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDC7O00311 HMGA1P5-201ENST00000412453 271 ntBASIC17.95■□□□□ 0.46
CDC7O00311 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.95■□□□□ 0.46
CDC7O00311 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.95■□□□□ 0.46
CDC7O00311 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.95■□□□□ 0.46
CDC7O00311 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDC7O00311 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.95■□□□□ 0.46
CDC7O00311 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.95■□□□□ 0.46
CDC7O00311 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDC7O00311 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC7O00311 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
CDC7O00311 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 HCG11-201ENST00000411553 5696 ntBASIC17.94■□□□□ 0.46
CDC7O00311 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 LETM1P2-201ENST00000597330 2178 ntBASIC17.94■□□□□ 0.46
CDC7O00311 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC7O00311 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC7O00311 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC7O00311 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC7O00311 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC7O00311 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC7O00311 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDC7O00311 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC7O00311 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC7O00311 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CDC7O00311 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDC7O00311 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.94■□□□□ 0.46
CDC7O00311 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDC7O00311 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 AP000997.3-201ENST00000623333 2250 ntBASIC17.93■□□□□ 0.46
CDC7O00311 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.93■□□□□ 0.46
CDC7O00311 AL024508.2-201ENST00000607749 1894 ntBASIC17.93■□□□□ 0.46
CDC7O00311 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.93■□□□□ 0.46
CDC7O00311 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms