Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP99D6REC4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP99D6REC4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.25■□□□□ 0.51
CFAP99D6REC4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP99D6REC4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP99D6REC4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP99D6REC4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP99D6REC4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.25■□□□□ 0.51
CFAP99D6REC4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
CFAP99D6REC4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.25■□□□□ 0.51
CFAP99D6REC4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.25■□□□□ 0.51
CFAP99D6REC4 GCSHP2-201ENST00000560971 527 ntBASIC18.25■□□□□ 0.51
CFAP99D6REC4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CFAP99D6REC4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CFAP99D6REC4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.25■□□□□ 0.51
CFAP99D6REC4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CFAP99D6REC4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP99D6REC4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CFAP99D6REC4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP99D6REC4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CFAP99D6REC4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP99D6REC4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP99D6REC4 AC009102.3-201ENST00000623118 1491 ntBASIC18.25■□□□□ 0.51
CFAP99D6REC4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP99D6REC4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP99D6REC4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.24■□□□□ 0.51
CFAP99D6REC4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP99D6REC4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CFAP99D6REC4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CFAP99D6REC4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP99D6REC4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CFAP99D6REC4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.24■□□□□ 0.51
CFAP99D6REC4 HOMER2P1-201ENST00000455653 964 ntBASIC18.24■□□□□ 0.51
CFAP99D6REC4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP99D6REC4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.24■□□□□ 0.51
CFAP99D6REC4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.24■□□□□ 0.51
CFAP99D6REC4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CFAP99D6REC4 KRT18P21-201ENST00000515767 1272 ntBASIC18.24■□□□□ 0.51
CFAP99D6REC4 AL441883.1-201ENST00000566170 1045 ntBASIC18.24■□□□□ 0.51
CFAP99D6REC4 MIR3917-201ENST00000580971 93 ntBASIC18.24■□□□□ 0.51
CFAP99D6REC4 AC011558.1-201ENST00000623459 338 ntBASIC18.24■□□□□ 0.51
CFAP99D6REC4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP99D6REC4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP99D6REC4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.24■□□□□ 0.51
CFAP99D6REC4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP99D6REC4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP99D6REC4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP99D6REC4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP99D6REC4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP99D6REC4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 TSPY5P-201ENST00000426936 936 ntBASIC18.23■□□□□ 0.51
CFAP99D6REC4 AC092647.4-201ENST00000457211 535 ntBASIC18.23■□□□□ 0.51
CFAP99D6REC4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 LINC01238-205ENST00000567549 1107 ntBASIC18.23■□□□□ 0.51
CFAP99D6REC4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 AC006011.2-201ENST00000621313 1158 ntBASIC18.23■□□□□ 0.51
CFAP99D6REC4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP99D6REC4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CFAP99D6REC4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.22■□□□□ 0.51
CFAP99D6REC4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP99D6REC4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP99D6REC4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CFAP99D6REC4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP99D6REC4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP99D6REC4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CFAP99D6REC4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms