Protein–RNA interactions for Protein: A6H8Y1

BDP1, Transcription factor TFIIIB component B'' homolog, humanhuman

Predictions only

Length 2,624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDP1A6H8Y1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BDP1A6H8Y1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
BDP1A6H8Y1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BDP1A6H8Y1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.41■□□□□ 0.54
BDP1A6H8Y1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.41■□□□□ 0.54
BDP1A6H8Y1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
BDP1A6H8Y1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.4■□□□□ 0.54
BDP1A6H8Y1 FAM58CP-201ENST00000435741 640 ntBASIC18.4■□□□□ 0.54
BDP1A6H8Y1 IGHV3-71-201ENST00000523324 359 ntBASIC18.4■□□□□ 0.54
BDP1A6H8Y1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.4■□□□□ 0.54
BDP1A6H8Y1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.39■□□□□ 0.54
BDP1A6H8Y1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.39■□□□□ 0.54
BDP1A6H8Y1 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
BDP1A6H8Y1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.39■□□□□ 0.54
BDP1A6H8Y1 SPDYE22P-201ENST00000582158 798 ntBASIC18.39■□□□□ 0.54
BDP1A6H8Y1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
BDP1A6H8Y1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BDP1A6H8Y1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
BDP1A6H8Y1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
BDP1A6H8Y1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 KRT18P41-201ENST00000518924 1277 ntBASIC18.39■□□□□ 0.53
BDP1A6H8Y1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 AC010336.2-201ENST00000564226 506 ntBASIC18.39■□□□□ 0.53
BDP1A6H8Y1 AL589182.2-201ENST00000619332 1049 ntBASIC18.39■□□□□ 0.53
BDP1A6H8Y1 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.39■□□□□ 0.53
BDP1A6H8Y1 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 CNN2P2-201ENST00000443536 909 ntBASIC18.38■□□□□ 0.53
BDP1A6H8Y1 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 CNN2P3-201ENST00000450201 906 ntBASIC18.38■□□□□ 0.53
BDP1A6H8Y1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 AC010654.1-201ENST00000615722 808 ntBASIC18.38■□□□□ 0.53
BDP1A6H8Y1 AL136317.3-201ENST00000618497 906 ntBASIC18.38■□□□□ 0.53
BDP1A6H8Y1 AC004877.2-201ENST00000623941 599 ntBASIC18.38■□□□□ 0.53
BDP1A6H8Y1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 AL121761.2-201ENST00000598007 1648 ntBASIC18.38■□□□□ 0.53
BDP1A6H8Y1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 AL512408.1-201ENST00000569378 2000 ntBASIC18.38■□□□□ 0.53
BDP1A6H8Y1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 AC116407.2-201ENST00000613639 860 ntBASIC18.38■□□□□ 0.53
BDP1A6H8Y1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BDP1A6H8Y1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms