Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.72■□□□□ 0.59
FNDC3AQ9Y2H6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.72■□□□□ 0.59
FNDC3AQ9Y2H6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.72■□□□□ 0.59
FNDC3AQ9Y2H6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC3AQ9Y2H6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC3AQ9Y2H6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.72■□□□□ 0.59
FNDC3AQ9Y2H6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC3AQ9Y2H6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC3AQ9Y2H6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC3AQ9Y2H6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
FNDC3AQ9Y2H6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 AL499627.1-201ENST00000569373 2188 ntBASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 AC068587.9-201ENST00000641814 219 ntBASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.71■□□□□ 0.59
FNDC3AQ9Y2H6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 MTMR9LP-203ENST00000426597 1545 ntBASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 AC092119.3-201ENST00000612618 583 ntBASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 AL357033.4-201ENST00000617703 1807 ntBASIC18.7■□□□□ 0.58
FNDC3AQ9Y2H6 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 ANO7L1-203ENST00000602586 1720 ntBASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 RNF165-205ENST00000588679 2904 ntBASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 NPAP1P7-201ENST00000613027 823 ntBASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 AC104581.1-202ENST00000635932 2618 ntBASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 AC005082.1-201ENST00000413042 2259 ntBASIC18.69■□□□□ 0.58
FNDC3AQ9Y2H6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC3AQ9Y2H6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms