Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 AC010240.3-201ENST00000607688 395 ntBASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 AC091076.1-201ENST00000610741 619 ntBASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 AC079602.3-201ENST00000623931 403 ntBASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 AC005332.1-201ENST00000577698 1310 ntBASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GTF3C4Q9UKN8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 SPDYE13P-201ENST00000445314 798 ntBASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
GTF3C4Q9UKN8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 VENTXP5-201ENST00000523979 775 ntBASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 AL136038.3-201ENST00000561909 1096 ntBASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 AP000550.4-202ENST00000639755 178 ntBASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GTF3C4Q9UKN8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GTF3C4Q9UKN8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms