Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FBXO40Q9UH90 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
FBXO40Q9UH90 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 AC009533.2-201ENST00000543664 586 ntBASIC20.76■□□□□ 0.91
FBXO40Q9UH90 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 AC005336.2-201ENST00000593183 939 ntBASIC20.76■□□□□ 0.91
FBXO40Q9UH90 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FBXO40Q9UH90 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 AL022342.1-201ENST00000400363 863 ntBASIC20.75■□□□□ 0.91
FBXO40Q9UH90 MTCL1P1-201ENST00000446207 792 ntBASIC20.75■□□□□ 0.91
FBXO40Q9UH90 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 HLA-A-201ENST00000376802 1334 ntBASIC20.75■□□□□ 0.91
FBXO40Q9UH90 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FBXO40Q9UH90 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 AC079776.4-201ENST00000511039 504 ntBASIC20.74■□□□□ 0.91
FBXO40Q9UH90 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 TP73-AS1-210ENST00000637775 1455 ntBASIC20.74■□□□□ 0.91
FBXO40Q9UH90 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO40Q9UH90 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 AL499627.1-201ENST00000569373 2188 ntBASIC20.73■□□□□ 0.91
FBXO40Q9UH90 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.73■□□□□ 0.91
FBXO40Q9UH90 KRT18P65-201ENST00000439811 1286 ntBASIC20.73■□□□□ 0.91
FBXO40Q9UH90 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms