Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ESRRAP1-201ENST00000400596 1257 ntBASIC18.09■□□□□ 0.49
MKS1Q9NXB0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
MKS1Q9NXB0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MKS1Q9NXB0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.08■□□□□ 0.49
MKS1Q9NXB0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
MKS1Q9NXB0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MKS1Q9NXB0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.08■□□□□ 0.49
MKS1Q9NXB0 KRT8P7-201ENST00000533003 1432 ntBASIC18.08■□□□□ 0.49
MKS1Q9NXB0 AC080080.1-201ENST00000625121 2420 ntBASIC18.08■□□□□ 0.49
MKS1Q9NXB0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.08■□□□□ 0.49
MKS1Q9NXB0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
MKS1Q9NXB0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
MKS1Q9NXB0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
MKS1Q9NXB0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MKS1Q9NXB0 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.08■□□□□ 0.48
MKS1Q9NXB0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
MKS1Q9NXB0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.08■□□□□ 0.48
MKS1Q9NXB0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
MKS1Q9NXB0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MKS1Q9NXB0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.08■□□□□ 0.48
MKS1Q9NXB0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MKS1Q9NXB0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MKS1Q9NXB0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MKS1Q9NXB0 LINC01126-201ENST00000623515 1646 ntBASIC18.08■□□□□ 0.48
MKS1Q9NXB0 AL138688.1-201ENST00000624851 1594 ntBASIC18.08■□□□□ 0.48
MKS1Q9NXB0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MKS1Q9NXB0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
MKS1Q9NXB0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MKS1Q9NXB0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MKS1Q9NXB0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 MIR4674-201ENST00000582457 87 ntBASIC18.07■□□□□ 0.48
MKS1Q9NXB0 AC073648.6-201ENST00000641589 218 ntBASIC18.07■□□□□ 0.48
MKS1Q9NXB0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MKS1Q9NXB0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 DUTP2-201ENST00000519164 463 ntBASIC18.06■□□□□ 0.48
MKS1Q9NXB0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 PCDHA12-202ENST00000613593 2588 ntBASIC18.06■□□□□ 0.48
MKS1Q9NXB0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MKS1Q9NXB0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms