Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 AL357033.4-201ENST00000617703 1807 ntBASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 RARRES2P10-201ENST00000564312 460 ntBASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCM2LQ9NUG4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 AL353708.3-201ENST00000610272 989 ntBASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 AL121829.2-201ENST00000620908 328 ntBASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 AL590326.2-201ENST00000625139 305 ntBASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 AC106820.2-201ENST00000563775 3264 ntBASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 AC141586.5-201ENST00000624546 2050 ntBASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2LQ9NUG4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 AC084018.2-201ENST00000613093 2607 ntBASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2LQ9NUG4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms