Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SPHK2Q9NRA0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 LINC00602-201ENST00000629776 2065 ntBASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 AL160237.2-201ENST00000556165 472 ntBASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 BNIP3P18-201ENST00000593976 575 ntBASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 AC009154.2-201ENST00000621177 724 ntBASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPHK2Q9NRA0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SPHK2Q9NRA0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 AC120498.9-201ENST00000339021 3867 ntBASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 AC009078.2-202ENST00000463353 338 ntBASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SPHK2Q9NRA0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 AL031598.1-201ENST00000561511 1773 ntBASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 AKR1C7P-201ENST00000305623 895 ntBASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 MTCL1P1-201ENST00000446207 792 ntBASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 AC096582.2-201ENST00000510860 516 ntBASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 AC005336.2-201ENST00000593183 939 ntBASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 AL121912.1-201ENST00000603683 238 ntBASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK2Q9NRA0 REXO1L6P-202ENST00000619970 1078 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms