Protein–RNA interactions for Protein: Q9GZU7

CTDSP1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1Q9GZU7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.14□□□□□ -0.15
CTDSP1Q9GZU7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 AP001160.3-201ENST00000601484 763 ntBASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 TSPY26P-201ENST00000476365 1326 ntBASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 AL096828.2-201ENST00000567259 1965 ntBASIC14.13□□□□□ -0.15
CTDSP1Q9GZU7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 MIR572-201ENST00000384983 95 ntBASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.12□□□□□ -0.15
CTDSP1Q9GZU7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms