Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.94■□□□□ 0.14
COL12A1Q99715 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.94■□□□□ 0.14
COL12A1Q99715 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.94■□□□□ 0.14
COL12A1Q99715 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.94■□□□□ 0.14
COL12A1Q99715 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL12A1Q99715 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL12A1Q99715 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.94■□□□□ 0.14
COL12A1Q99715 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL12A1Q99715 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.94■□□□□ 0.14
COL12A1Q99715 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL12A1Q99715 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.93■□□□□ 0.14
COL12A1Q99715 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL12A1Q99715 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL12A1Q99715 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
COL12A1Q99715 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.93■□□□□ 0.14
COL12A1Q99715 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.93■□□□□ 0.14
COL12A1Q99715 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.93■□□□□ 0.14
COL12A1Q99715 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.93■□□□□ 0.14
COL12A1Q99715 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.93■□□□□ 0.14
COL12A1Q99715 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.93■□□□□ 0.14
COL12A1Q99715 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
COL12A1Q99715 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL12A1Q99715 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
COL12A1Q99715 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.93■□□□□ 0.14
COL12A1Q99715 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.93■□□□□ 0.14
COL12A1Q99715 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL12A1Q99715 GPR89P-201ENST00000407924 1495 ntBASIC15.93■□□□□ 0.14
COL12A1Q99715 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.93■□□□□ 0.14
COL12A1Q99715 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL12A1Q99715 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL12A1Q99715 AP000344.2-201ENST00000512987 629 ntBASIC15.93■□□□□ 0.14
COL12A1Q99715 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL12A1Q99715 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL12A1Q99715 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL12A1Q99715 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.93■□□□□ 0.14
COL12A1Q99715 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.93■□□□□ 0.14
COL12A1Q99715 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.93■□□□□ 0.14
COL12A1Q99715 AL139288.1-201ENST00000623748 933 ntBASIC15.93■□□□□ 0.14
COL12A1Q99715 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL12A1Q99715 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.93■□□□□ 0.14
COL12A1Q99715 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
COL12A1Q99715 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.92■□□□□ 0.14
COL12A1Q99715 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.92■□□□□ 0.14
COL12A1Q99715 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.92■□□□□ 0.14
COL12A1Q99715 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 AC125634.1-201ENST00000438758 1403 ntBASIC15.92■□□□□ 0.14
COL12A1Q99715 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
COL12A1Q99715 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.92■□□□□ 0.14
COL12A1Q99715 LAGE3P1-201ENST00000425356 484 ntBASIC15.92■□□□□ 0.14
COL12A1Q99715 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.92■□□□□ 0.14
COL12A1Q99715 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
COL12A1Q99715 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.92■□□□□ 0.14
COL12A1Q99715 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.92■□□□□ 0.14
COL12A1Q99715 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.92■□□□□ 0.14
COL12A1Q99715 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.92■□□□□ 0.14
COL12A1Q99715 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.92■□□□□ 0.14
COL12A1Q99715 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.92■□□□□ 0.14
COL12A1Q99715 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.92■□□□□ 0.14
COL12A1Q99715 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.92■□□□□ 0.14
COL12A1Q99715 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.92■□□□□ 0.14
COL12A1Q99715 AL359881.2-201ENST00000602973 570 ntBASIC15.92■□□□□ 0.14
COL12A1Q99715 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.92■□□□□ 0.14
COL12A1Q99715 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL12A1Q99715 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL12A1Q99715 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL12A1Q99715 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL12A1Q99715 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
COL12A1Q99715 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
COL12A1Q99715 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.91■□□□□ 0.14
COL12A1Q99715 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.91■□□□□ 0.14
COL12A1Q99715 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL12A1Q99715 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
COL12A1Q99715 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL12A1Q99715 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
COL12A1Q99715 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL12A1Q99715 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL12A1Q99715 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL12A1Q99715 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
COL12A1Q99715 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.91■□□□□ 0.14
COL12A1Q99715 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL12A1Q99715 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL12A1Q99715 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL12A1Q99715 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.91■□□□□ 0.14
COL12A1Q99715 AC073621.1-201ENST00000392730 636 ntBASIC15.91■□□□□ 0.14
COL12A1Q99715 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms