Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC26.21■■□□□ 1.79
SCAF11Q99590 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF11Q99590 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF11Q99590 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
SCAF11Q99590 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
SCAF11Q99590 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SCAF11Q99590 PMP22-202ENST00000395936 816 ntTSL 3 BASIC26.2■■□□□ 1.78
SCAF11Q99590 RAB17-203ENST00000409576 466 ntTSL 3 BASIC26.2■■□□□ 1.78
SCAF11Q99590 AP006288.1-201ENST00000446065 395 ntBASIC26.2■■□□□ 1.78
SCAF11Q99590 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC26.2■■□□□ 1.78
SCAF11Q99590 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC26.2■■□□□ 1.78
SCAF11Q99590 MIR3687-2-201ENST00000577708 61 ntBASIC26.2■■□□□ 1.78
SCAF11Q99590 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC26.2■■□□□ 1.78
SCAF11Q99590 MIR3687-1-201ENST00000614492 61 ntBASIC26.2■■□□□ 1.78
SCAF11Q99590 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
SCAF11Q99590 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SCAF11Q99590 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SCAF11Q99590 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SCAF11Q99590 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SCAF11Q99590 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC26.2■■□□□ 1.78
SCAF11Q99590 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SCAF11Q99590 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SCAF11Q99590 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SCAF11Q99590 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC26.2■■□□□ 1.78
SCAF11Q99590 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SCAF11Q99590 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC26.2■■□□□ 1.78
SCAF11Q99590 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SCAF11Q99590 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SCAF11Q99590 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCAF11Q99590 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC26.19■■□□□ 1.78
SCAF11Q99590 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
SCAF11Q99590 DANCR-204ENST00000444958 709 ntTSL 3 BASIC26.19■■□□□ 1.78
SCAF11Q99590 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC26.19■■□□□ 1.78
SCAF11Q99590 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC26.19■■□□□ 1.78
SCAF11Q99590 AC011467.2-201ENST00000598425 242 ntBASIC26.19■■□□□ 1.78
SCAF11Q99590 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCAF11Q99590 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC26.19■■□□□ 1.78
SCAF11Q99590 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCAF11Q99590 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCAF11Q99590 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
SCAF11Q99590 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCAF11Q99590 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SCAF11Q99590 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC26.18■■□□□ 1.78
SCAF11Q99590 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCAF11Q99590 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
SCAF11Q99590 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCAF11Q99590 COA5-202ENST00000409997 557 ntTSL 4 BASIC26.18■■□□□ 1.78
SCAF11Q99590 AC002347.1-201ENST00000569543 541 ntBASIC26.18■■□□□ 1.78
SCAF11Q99590 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC26.18■■□□□ 1.78
SCAF11Q99590 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SCAF11Q99590 AL139288.1-201ENST00000623748 933 ntBASIC26.18■■□□□ 1.78
SCAF11Q99590 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCAF11Q99590 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SCAF11Q99590 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCAF11Q99590 PTGES2-AS1-201ENST00000443493 2100 ntBASIC26.18■■□□□ 1.78
SCAF11Q99590 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC26.18■■□□□ 1.78
SCAF11Q99590 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC26.18■■□□□ 1.78
SCAF11Q99590 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCAF11Q99590 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCAF11Q99590 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC26.18■■□□□ 1.78
SCAF11Q99590 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCAF11Q99590 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCAF11Q99590 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SCAF11Q99590 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCAF11Q99590 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SCAF11Q99590 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC26.17■■□□□ 1.78
SCAF11Q99590 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC26.17■■□□□ 1.78
SCAF11Q99590 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC26.17■■□□□ 1.78
SCAF11Q99590 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC26.17■■□□□ 1.78
SCAF11Q99590 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC26.17■■□□□ 1.78
SCAF11Q99590 AC009533.2-201ENST00000543664 586 ntBASIC26.17■■□□□ 1.78
SCAF11Q99590 COX5A-204ENST00000567270 579 ntTSL 3 BASIC26.17■■□□□ 1.78
SCAF11Q99590 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF11Q99590 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF11Q99590 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF11Q99590 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF11Q99590 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
SCAF11Q99590 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF11Q99590 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC26.17■■□□□ 1.78
SCAF11Q99590 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC26.17■■□□□ 1.78
SCAF11Q99590 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF11Q99590 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
SCAF11Q99590 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF11Q99590 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC26.17■■□□□ 1.78
SCAF11Q99590 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
SCAF11Q99590 RNA5SP416-201ENST00000516838 111 ntBASIC26.17■■□□□ 1.78
SCAF11Q99590 RPS15-207ENST00000591032 550 ntTSL 3 BASIC26.17■■□□□ 1.78
SCAF11Q99590 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCAF11Q99590 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC26.16■■□□□ 1.78
SCAF11Q99590 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF11Q99590 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
SCAF11Q99590 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC26.16■■□□□ 1.78
SCAF11Q99590 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF11Q99590 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC26.16■■□□□ 1.78
SCAF11Q99590 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC26.16■■□□□ 1.78
SCAF11Q99590 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF11Q99590 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SCAF11Q99590 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC26.16■■□□□ 1.78
SCAF11Q99590 ABCD1P5-201ENST00000445663 754 ntBASIC26.16■■□□□ 1.78
SCAF11Q99590 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms