Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AC148477.9-201ENST00000623974 539 ntBASIC5.54□□□□□ -1.52
HMCN1Q96RW7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 TMEM14DP-201ENST00000422205 345 ntBASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 SPDYE21P-201ENST00000413323 827 ntBASIC5.54□□□□□ -1.52
HMCN1Q96RW7 RHOQP3-201ENST00000437982 621 ntBASIC5.54□□□□□ -1.52
HMCN1Q96RW7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AC140912.1-201ENST00000577171 1054 ntBASIC5.54□□□□□ -1.52
HMCN1Q96RW7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 KRT89P-201ENST00000620027 1478 ntBASIC5.54□□□□□ -1.52
HMCN1Q96RW7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AC079776.2-201ENST00000641154 1609 ntBASIC5.54□□□□□ -1.52
HMCN1Q96RW7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AL627223.1-201ENST00000416693 442 ntBASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 SLC25A39P2-201ENST00000537614 270 ntBASIC5.54□□□□□ -1.52
HMCN1Q96RW7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AC103810.3-201ENST00000583567 96 ntBASIC5.54□□□□□ -1.52
HMCN1Q96RW7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 KRT8P44-201ENST00000441609 1350 ntBASIC5.53□□□□□ -1.52
HMCN1Q96RW7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 AC022210.1-201ENST00000449856 793 ntBASIC5.53□□□□□ -1.52
HMCN1Q96RW7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 AC104390.1-201ENST00000555663 520 ntBASIC5.53□□□□□ -1.52
HMCN1Q96RW7 MIR4259-201ENST00000584466 101 ntBASIC5.53□□□□□ -1.52
HMCN1Q96RW7 SPCS2P2-201ENST00000603270 608 ntBASIC5.53□□□□□ -1.52
HMCN1Q96RW7 U62317.3-201ENST00000608319 855 ntBASIC5.53□□□□□ -1.52
HMCN1Q96RW7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 LINC01521-201ENST00000504184 1943 ntBASIC5.53□□□□□ -1.52
HMCN1Q96RW7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC5.53□□□□□ -1.52
HMCN1Q96RW7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms