Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ITCHQ96J02 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ITCHQ96J02 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.47■□□□□ 0.39
ITCHQ96J02 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ITCHQ96J02 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ITCHQ96J02 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ITCHQ96J02 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ITCHQ96J02 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ITCHQ96J02 GPAT2P1-201ENST00000444924 1672 ntBASIC17.47■□□□□ 0.39
ITCHQ96J02 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.47■□□□□ 0.39
ITCHQ96J02 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.47■□□□□ 0.39
ITCHQ96J02 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.47■□□□□ 0.39
ITCHQ96J02 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ITCHQ96J02 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ITCHQ96J02 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ITCHQ96J02 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ITCHQ96J02 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ITCHQ96J02 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ITCHQ96J02 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ITCHQ96J02 KRT8P50-201ENST00000562022 1438 ntBASIC17.47■□□□□ 0.39
ITCHQ96J02 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.46■□□□□ 0.39
ITCHQ96J02 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ITCHQ96J02 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
ITCHQ96J02 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.46■□□□□ 0.39
ITCHQ96J02 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.46■□□□□ 0.39
ITCHQ96J02 AC096733.2-201ENST00000609937 1394 ntBASIC17.46■□□□□ 0.39
ITCHQ96J02 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ITCHQ96J02 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ITCHQ96J02 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ITCHQ96J02 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.46■□□□□ 0.39
ITCHQ96J02 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.46■□□□□ 0.39
ITCHQ96J02 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.46■□□□□ 0.39
ITCHQ96J02 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.46■□□□□ 0.39
ITCHQ96J02 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ITCHQ96J02 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
ITCHQ96J02 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ITCHQ96J02 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ITCHQ96J02 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ITCHQ96J02 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ITCHQ96J02 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ITCHQ96J02 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ITCHQ96J02 AL096828.2-201ENST00000567259 1965 ntBASIC17.46■□□□□ 0.39
ITCHQ96J02 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
ITCHQ96J02 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
ITCHQ96J02 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ITCHQ96J02 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.45■□□□□ 0.38
ITCHQ96J02 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ITCHQ96J02 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.45■□□□□ 0.38
ITCHQ96J02 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.45■□□□□ 0.38
ITCHQ96J02 FAM197Y1-201ENST00000421178 764 ntBASIC17.45■□□□□ 0.38
ITCHQ96J02 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.45■□□□□ 0.38
ITCHQ96J02 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.45■□□□□ 0.38
ITCHQ96J02 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.45■□□□□ 0.38
ITCHQ96J02 DGCR10-201ENST00000609839 495 ntBASIC17.45■□□□□ 0.38
ITCHQ96J02 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 FAM197Y4-202ENST00000622692 608 ntBASIC17.45■□□□□ 0.38
ITCHQ96J02 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.45■□□□□ 0.38
ITCHQ96J02 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 LINC00896-202ENST00000609602 2128 ntBASIC17.45■□□□□ 0.38
ITCHQ96J02 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 AL135905.2-201ENST00000584934 1404 ntBASIC17.45■□□□□ 0.38
ITCHQ96J02 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.45■□□□□ 0.38
ITCHQ96J02 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ITCHQ96J02 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.44■□□□□ 0.38
ITCHQ96J02 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.44■□□□□ 0.38
ITCHQ96J02 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.44■□□□□ 0.38
ITCHQ96J02 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.44■□□□□ 0.38
ITCHQ96J02 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.44■□□□□ 0.38
ITCHQ96J02 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.44■□□□□ 0.38
ITCHQ96J02 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ITCHQ96J02 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 MFAP1P1-201ENST00000442257 1255 ntBASIC17.44■□□□□ 0.38
ITCHQ96J02 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ITCHQ96J02 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms