Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC097658.1-201ENST00000475555 843 ntBASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 AC090192.1-201ENST00000517740 490 ntBASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHMP6Q96FZ7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHMP6Q96FZ7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 AC006557.6-201ENST00000623071 864 ntBASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 AC046158.3-201ENST00000624947 2558 ntBASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP6Q96FZ7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 GUSBP6-202ENST00000438529 1198 ntBASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 AC005829.2-201ENST00000571422 1056 ntBASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 AL096828.2-201ENST00000567259 1965 ntBASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP6Q96FZ7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP6Q96FZ7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms