Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 RCC2P3-201ENST00000418112 1537 ntBASIC19.29■□□□□ 0.68
ATP2A3Q93084 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.29■□□□□ 0.68
ATP2A3Q93084 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.29■□□□□ 0.68
ATP2A3Q93084 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.29■□□□□ 0.68
ATP2A3Q93084 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.29■□□□□ 0.68
ATP2A3Q93084 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2A3Q93084 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 AL512353.2-201ENST00000448759 1962 ntBASIC19.28■□□□□ 0.68
ATP2A3Q93084 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ATP2A3Q93084 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 KRT8P7-201ENST00000533003 1432 ntBASIC19.28■□□□□ 0.68
ATP2A3Q93084 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2A3Q93084 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
ATP2A3Q93084 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2A3Q93084 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.28■□□□□ 0.68
ATP2A3Q93084 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2A3Q93084 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.28■□□□□ 0.68
ATP2A3Q93084 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.28■□□□□ 0.68
ATP2A3Q93084 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2A3Q93084 MIR3917-201ENST00000580971 93 ntBASIC19.28■□□□□ 0.68
ATP2A3Q93084 NPAP1P7-201ENST00000613027 823 ntBASIC19.28■□□□□ 0.68
ATP2A3Q93084 AL157888.1-201ENST00000631930 593 ntBASIC19.28■□□□□ 0.68
ATP2A3Q93084 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ATP2A3Q93084 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ATP2A3Q93084 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2A3Q93084 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2A3Q93084 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A3Q93084 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ATP2A3Q93084 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A3Q93084 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A3Q93084 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A3Q93084 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A3Q93084 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ATP2A3Q93084 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A3Q93084 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A3Q93084 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A3Q93084 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ATP2A3Q93084 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP2A3Q93084 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP2A3Q93084 BX276092.5-203ENST00000456199 560 ntBASIC19.27■□□□□ 0.68
ATP2A3Q93084 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A3Q93084 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.27■□□□□ 0.68
ATP2A3Q93084 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
ATP2A3Q93084 AL121672.3-201ENST00000608644 468 ntBASIC19.27■□□□□ 0.68
ATP2A3Q93084 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.27■□□□□ 0.68
ATP2A3Q93084 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
ATP2A3Q93084 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A3Q93084 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A3Q93084 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ATP2A3Q93084 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.27■□□□□ 0.67
ATP2A3Q93084 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2A3Q93084 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2A3Q93084 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2A3Q93084 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2A3Q93084 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2A3Q93084 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.27■□□□□ 0.67
ATP2A3Q93084 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A3Q93084 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A3Q93084 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A3Q93084 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A3Q93084 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A3Q93084 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A3Q93084 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP2A3Q93084 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
ATP2A3Q93084 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A3Q93084 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A3Q93084 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A3Q93084 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A3Q93084 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A3Q93084 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A3Q93084 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ATP2A3Q93084 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A3Q93084 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
ATP2A3Q93084 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP2A3Q93084 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.26■□□□□ 0.67
ATP2A3Q93084 HLA-F-220ENST00000434407 884 ntBASIC19.26■□□□□ 0.67
ATP2A3Q93084 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A3Q93084 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms