Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.29■□□□□ 0.36
TM9SF4Q92544 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.29■□□□□ 0.36
TM9SF4Q92544 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.29■□□□□ 0.36
TM9SF4Q92544 PRELID1P1-202ENST00000567272 903 ntBASIC17.29■□□□□ 0.36
TM9SF4Q92544 MIR3652-201ENST00000579335 131 ntBASIC17.29■□□□□ 0.36
TM9SF4Q92544 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TM9SF4Q92544 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
TM9SF4Q92544 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.29■□□□□ 0.36
TM9SF4Q92544 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.29■□□□□ 0.36
TM9SF4Q92544 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.29■□□□□ 0.36
TM9SF4Q92544 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TM9SF4Q92544 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM9SF4Q92544 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.28■□□□□ 0.36
TM9SF4Q92544 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
TM9SF4Q92544 AC036111.1-201ENST00000533973 1582 ntBASIC17.28■□□□□ 0.36
TM9SF4Q92544 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM9SF4Q92544 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.28■□□□□ 0.36
TM9SF4Q92544 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM9SF4Q92544 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.28■□□□□ 0.36
TM9SF4Q92544 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.28■□□□□ 0.36
TM9SF4Q92544 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM9SF4Q92544 AL023284.2-201ENST00000405850 579 ntBASIC17.28■□□□□ 0.36
TM9SF4Q92544 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.28■□□□□ 0.36
TM9SF4Q92544 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.28■□□□□ 0.36
TM9SF4Q92544 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.28■□□□□ 0.36
TM9SF4Q92544 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TM9SF4Q92544 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.28■□□□□ 0.36
TM9SF4Q92544 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.28■□□□□ 0.36
TM9SF4Q92544 AC011498.5-201ENST00000592027 486 ntBASIC17.28■□□□□ 0.36
TM9SF4Q92544 AC092329.2-201ENST00000598402 547 ntBASIC17.28■□□□□ 0.36
TM9SF4Q92544 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.28■□□□□ 0.36
TM9SF4Q92544 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TM9SF4Q92544 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.28■□□□□ 0.36
TM9SF4Q92544 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.28■□□□□ 0.36
TM9SF4Q92544 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM9SF4Q92544 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TM9SF4Q92544 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM9SF4Q92544 PCDHB18P-201ENST00000524813 2368 ntBASIC17.28■□□□□ 0.36
TM9SF4Q92544 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM9SF4Q92544 BICD1-207ENST00000551848 1962 ntBASIC17.28■□□□□ 0.36
TM9SF4Q92544 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.28■□□□□ 0.36
TM9SF4Q92544 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM9SF4Q92544 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM9SF4Q92544 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM9SF4Q92544 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM9SF4Q92544 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM9SF4Q92544 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TM9SF4Q92544 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM9SF4Q92544 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM9SF4Q92544 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 AC112497.1-201ENST00000624824 639 ntBASIC17.27■□□□□ 0.36
TM9SF4Q92544 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM9SF4Q92544 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TM9SF4Q92544 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM9SF4Q92544 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM9SF4Q92544 KRT8P3-201ENST00000519669 1449 ntBASIC17.27■□□□□ 0.35
TM9SF4Q92544 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TM9SF4Q92544 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TM9SF4Q92544 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
TM9SF4Q92544 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TM9SF4Q92544 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TM9SF4Q92544 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TM9SF4Q92544 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TM9SF4Q92544 AC093525.10-201ENST00000625130 1569 ntBASIC17.27■□□□□ 0.35
TM9SF4Q92544 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TM9SF4Q92544 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TM9SF4Q92544 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
TM9SF4Q92544 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TM9SF4Q92544 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TM9SF4Q92544 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TM9SF4Q92544 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms