Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 AF228730.7-201ENST00000641842 219 ntBASIC18.34■□□□□ 0.53
HMGB4Q8WW32 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGB4Q8WW32 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.33■□□□□ 0.53
HMGB4Q8WW32 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.33■□□□□ 0.53
HMGB4Q8WW32 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGB4Q8WW32 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.33■□□□□ 0.53
HMGB4Q8WW32 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGB4Q8WW32 IL9RP2-201ENST00000423948 1312 ntBASIC18.33■□□□□ 0.53
HMGB4Q8WW32 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HMGB4Q8WW32 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 AL161938.1-201ENST00000569833 2180 ntBASIC18.33■□□□□ 0.52
HMGB4Q8WW32 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 AC132008.2-207ENST00000454517 770 ntBASIC18.33■□□□□ 0.52
HMGB4Q8WW32 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 AF186996.4-201ENST00000467186 377 ntBASIC18.33■□□□□ 0.52
HMGB4Q8WW32 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 AC008687.5-201ENST00000593746 558 ntBASIC18.33■□□□□ 0.52
HMGB4Q8WW32 AL671883.3-201ENST00000603274 991 ntBASIC18.33■□□□□ 0.52
HMGB4Q8WW32 AC008608.2-201ENST00000606089 416 ntBASIC18.33■□□□□ 0.52
HMGB4Q8WW32 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.33■□□□□ 0.52
HMGB4Q8WW32 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGB4Q8WW32 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 AL049812.1-201ENST00000432563 2267 ntBASIC18.32■□□□□ 0.52
HMGB4Q8WW32 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 AL031284.1-201ENST00000419297 478 ntBASIC18.32■□□□□ 0.52
HMGB4Q8WW32 KRT18P67-201ENST00000432816 1264 ntBASIC18.32■□□□□ 0.52
HMGB4Q8WW32 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 RNA5SP419-201ENST00000515908 135 ntBASIC18.32■□□□□ 0.52
HMGB4Q8WW32 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGB4Q8WW32 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGB4Q8WW32 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HMGB4Q8WW32 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HMGB4Q8WW32 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HMGB4Q8WW32 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGB4Q8WW32 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGB4Q8WW32 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HMGB4Q8WW32 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HMGB4Q8WW32 AC113404.2-201ENST00000507884 177 ntBASIC18.31■□□□□ 0.52
HMGB4Q8WW32 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGB4Q8WW32 AC148477.8-201ENST00000624298 468 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms