Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 GMCL1P1-201ENST00000463439 1581 ntBASIC18.55■□□□□ 0.56
PTCD2Q8WV60 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.54■□□□□ 0.56
PTCD2Q8WV60 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 KRT18P23-201ENST00000435622 1283 ntBASIC18.54■□□□□ 0.56
PTCD2Q8WV60 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCD2Q8WV60 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 AC009102.3-201ENST00000623118 1491 ntBASIC18.53■□□□□ 0.56
PTCD2Q8WV60 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 GCSHP2-201ENST00000560971 527 ntBASIC18.53■□□□□ 0.56
PTCD2Q8WV60 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTCD2Q8WV60 AC020763.4-201ENST00000623414 4170 ntBASIC18.52■□□□□ 0.56
PTCD2Q8WV60 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 ESPNP-201ENST00000270691 2015 ntBASIC18.52■□□□□ 0.56
PTCD2Q8WV60 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 AC007613.1-201ENST00000572811 2597 ntBASIC18.52■□□□□ 0.56
PTCD2Q8WV60 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 FAM8A6P-201ENST00000407496 1135 ntBASIC18.52■□□□□ 0.56
PTCD2Q8WV60 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 AL359075.1-203ENST00000462729 1002 ntBASIC18.52■□□□□ 0.56
PTCD2Q8WV60 AL512604.3-201ENST00000569583 964 ntBASIC18.52■□□□□ 0.56
PTCD2Q8WV60 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 NOC2LP2-201ENST00000407594 1944 ntBASIC18.52■□□□□ 0.56
PTCD2Q8WV60 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCD2Q8WV60 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTCD2Q8WV60 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.52■□□□□ 0.55
PTCD2Q8WV60 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.52■□□□□ 0.55
PTCD2Q8WV60 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms