Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNED1Q8TER0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC22.21■■□□□ 1.15
SNED1Q8TER0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNED1Q8TER0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNED1Q8TER0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC22.21■■□□□ 1.15
SNED1Q8TER0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNED1Q8TER0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNED1Q8TER0 AC107918.4-202ENST00000641623 219 ntBASIC22.21■■□□□ 1.15
SNED1Q8TER0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNED1Q8TER0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNED1Q8TER0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNED1Q8TER0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.21■■□□□ 1.15
SNED1Q8TER0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNED1Q8TER0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNED1Q8TER0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNED1Q8TER0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.2■■□□□ 1.14
SNED1Q8TER0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SNED1Q8TER0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNED1Q8TER0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.2■■□□□ 1.14
SNED1Q8TER0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SNED1Q8TER0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.2■■□□□ 1.14
SNED1Q8TER0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNED1Q8TER0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNED1Q8TER0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC22.2■■□□□ 1.14
SNED1Q8TER0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SNED1Q8TER0 AC004832.2-201ENST00000426397 482 ntBASIC22.2■■□□□ 1.14
SNED1Q8TER0 KRT18P3-201ENST00000451602 1288 ntBASIC22.2■■□□□ 1.14
SNED1Q8TER0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SNED1Q8TER0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC22.2■■□□□ 1.14
SNED1Q8TER0 AL139424.1-201ENST00000607572 797 ntBASIC22.2■■□□□ 1.14
SNED1Q8TER0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC22.2■■□□□ 1.14
SNED1Q8TER0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC22.2■■□□□ 1.14
SNED1Q8TER0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC22.2■■□□□ 1.14
SNED1Q8TER0 AP002414.3-201ENST00000589352 1468 ntBASIC22.2■■□□□ 1.14
SNED1Q8TER0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.2■■□□□ 1.14
SNED1Q8TER0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNED1Q8TER0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SNED1Q8TER0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22.2■■□□□ 1.14
SNED1Q8TER0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SNED1Q8TER0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SNED1Q8TER0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SNED1Q8TER0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SNED1Q8TER0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SNED1Q8TER0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
SNED1Q8TER0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC22.19■■□□□ 1.14
SNED1Q8TER0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.19■■□□□ 1.14
SNED1Q8TER0 AC004967.1-201ENST00000453589 447 ntBASIC22.19■■□□□ 1.14
SNED1Q8TER0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.19■■□□□ 1.14
SNED1Q8TER0 AC040169.1-201ENST00000565382 521 ntBASIC22.19■■□□□ 1.14
SNED1Q8TER0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SNED1Q8TER0 AC083906.6-201ENST00000641366 219 ntBASIC22.19■■□□□ 1.14
SNED1Q8TER0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SNED1Q8TER0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.19■■□□□ 1.14
SNED1Q8TER0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SNED1Q8TER0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC22.19■■□□□ 1.14
SNED1Q8TER0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.19■■□□□ 1.14
SNED1Q8TER0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.19■■□□□ 1.14
SNED1Q8TER0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SNED1Q8TER0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SNED1Q8TER0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
SNED1Q8TER0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
SNED1Q8TER0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SNED1Q8TER0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SNED1Q8TER0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SNED1Q8TER0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SNED1Q8TER0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SNED1Q8TER0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC22.18■■□□□ 1.14
SNED1Q8TER0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC22.18■■□□□ 1.14
SNED1Q8TER0 UNC93B6-202ENST00000528242 690 ntBASIC22.18■■□□□ 1.14
SNED1Q8TER0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC22.18■■□□□ 1.14
SNED1Q8TER0 AC027796.2-201ENST00000575326 344 ntBASIC22.18■■□□□ 1.14
SNED1Q8TER0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SNED1Q8TER0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC22.18■■□□□ 1.14
SNED1Q8TER0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC22.18■■□□□ 1.14
SNED1Q8TER0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC22.18■■□□□ 1.14
SNED1Q8TER0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SNED1Q8TER0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.18■■□□□ 1.14
SNED1Q8TER0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SNED1Q8TER0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.18■■□□□ 1.14
SNED1Q8TER0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
SNED1Q8TER0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SNED1Q8TER0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.18■■□□□ 1.14
SNED1Q8TER0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.17■■□□□ 1.14
SNED1Q8TER0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SNED1Q8TER0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
SNED1Q8TER0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SNED1Q8TER0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SNED1Q8TER0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SNED1Q8TER0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
SNED1Q8TER0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SNED1Q8TER0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SNED1Q8TER0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC22.17■■□□□ 1.14
SNED1Q8TER0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SNED1Q8TER0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SNED1Q8TER0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
SNED1Q8TER0 AC022898.2-201ENST00000616822 1312 ntBASIC22.17■■□□□ 1.14
SNED1Q8TER0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
SNED1Q8TER0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SNED1Q8TER0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.17■■□□□ 1.14
SNED1Q8TER0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms