Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CFAP43Q8NDM7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
CFAP43Q8NDM7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
CFAP43Q8NDM7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC28.53■■■□□ 2.16
CFAP43Q8NDM7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC28.53■■■□□ 2.16
CFAP43Q8NDM7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
CFAP43Q8NDM7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC28.53■■■□□ 2.16
CFAP43Q8NDM7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC28.53■■■□□ 2.16
CFAP43Q8NDM7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC28.53■■■□□ 2.16
CFAP43Q8NDM7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CFAP43Q8NDM7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CFAP43Q8NDM7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CFAP43Q8NDM7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 DNAJB3-201ENST00000446806 729 ntBASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
CFAP43Q8NDM7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
CFAP43Q8NDM7 DDT-203ENST00000403754 569 ntTSL 3 BASIC28.51■■■□□ 2.16
CFAP43Q8NDM7 AC004832.2-201ENST00000426397 482 ntBASIC28.51■■■□□ 2.16
CFAP43Q8NDM7 DDT-206ENST00000430101 573 ntTSL 2 BASIC28.51■■■□□ 2.16
CFAP43Q8NDM7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC28.51■■■□□ 2.16
CFAP43Q8NDM7 DNAJB3-202ENST00000449667 1266 ntBASIC28.51■■■□□ 2.16
CFAP43Q8NDM7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC28.51■■■□□ 2.16
CFAP43Q8NDM7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC28.51■■■□□ 2.16
CFAP43Q8NDM7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
CFAP43Q8NDM7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC28.51■■■□□ 2.15
CFAP43Q8NDM7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CFAP43Q8NDM7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC28.51■■■□□ 2.15
CFAP43Q8NDM7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CFAP43Q8NDM7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC28.51■■■□□ 2.15
CFAP43Q8NDM7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC28.51■■■□□ 2.15
CFAP43Q8NDM7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC28.51■■■□□ 2.15
CFAP43Q8NDM7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC28.51■■■□□ 2.15
CFAP43Q8NDM7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CFAP43Q8NDM7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC28.5■■■□□ 2.15
CFAP43Q8NDM7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC28.5■■■□□ 2.15
CFAP43Q8NDM7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC28.5■■■□□ 2.15
CFAP43Q8NDM7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
CFAP43Q8NDM7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CFAP43Q8NDM7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC28.5■■■□□ 2.15
CFAP43Q8NDM7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CFAP43Q8NDM7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CFAP43Q8NDM7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC28.5■■■□□ 2.15
CFAP43Q8NDM7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC28.5■■■□□ 2.15
CFAP43Q8NDM7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC28.5■■■□□ 2.15
CFAP43Q8NDM7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC28.5■■■□□ 2.15
CFAP43Q8NDM7 AL031598.1-201ENST00000561511 1773 ntBASIC28.5■■■□□ 2.15
CFAP43Q8NDM7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CFAP43Q8NDM7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CFAP43Q8NDM7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC28.49■■■□□ 2.15
CFAP43Q8NDM7 AC012640.2-201ENST00000561606 901 ntBASIC28.49■■■□□ 2.15
CFAP43Q8NDM7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC28.49■■■□□ 2.15
CFAP43Q8NDM7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
CFAP43Q8NDM7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC28.49■■■□□ 2.15
CFAP43Q8NDM7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CFAP43Q8NDM7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CFAP43Q8NDM7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
CFAP43Q8NDM7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC28.47■■■□□ 2.15
CFAP43Q8NDM7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CFAP43Q8NDM7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CFAP43Q8NDM7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CFAP43Q8NDM7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CFAP43Q8NDM7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CFAP43Q8NDM7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC28.47■■■□□ 2.15
CFAP43Q8NDM7 AP006288.1-201ENST00000446065 395 ntBASIC28.47■■■□□ 2.15
CFAP43Q8NDM7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
CFAP43Q8NDM7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CFAP43Q8NDM7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CFAP43Q8NDM7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CFAP43Q8NDM7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC28.47■■■□□ 2.15
CFAP43Q8NDM7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms