Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC89Q8N998 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC89Q8N998 MIR564-202ENST00000385049 94 ntBASIC19.03■□□□□ 0.64
CCDC89Q8N998 NUDT16P1-203ENST00000513809 620 ntBASIC19.03■□□□□ 0.64
CCDC89Q8N998 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC89Q8N998 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC89Q8N998 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC89Q8N998 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.03■□□□□ 0.64
CCDC89Q8N998 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC89Q8N998 GPAT2P1-201ENST00000444924 1672 ntBASIC19.03■□□□□ 0.64
CCDC89Q8N998 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC89Q8N998 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC89Q8N998 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC89Q8N998 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC89Q8N998 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC89Q8N998 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC89Q8N998 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC89Q8N998 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC89Q8N998 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCDC89Q8N998 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CCDC89Q8N998 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC89Q8N998 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC89Q8N998 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC89Q8N998 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC89Q8N998 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC89Q8N998 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC89Q8N998 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC89Q8N998 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC89Q8N998 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC89Q8N998 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC89Q8N998 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC89Q8N998 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC89Q8N998 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC89Q8N998 AC142381.4-202ENST00000563973 229 ntBASIC19.02■□□□□ 0.64
CCDC89Q8N998 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC89Q8N998 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC89Q8N998 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCDC89Q8N998 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC89Q8N998 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC89Q8N998 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCDC89Q8N998 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CCDC89Q8N998 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC89Q8N998 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC89Q8N998 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC89Q8N998 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC89Q8N998 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC89Q8N998 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC89Q8N998 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC89Q8N998 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC89Q8N998 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC89Q8N998 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC89Q8N998 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC89Q8N998 AC034236.2-201ENST00000606662 1610 ntBASIC19.01■□□□□ 0.63
CCDC89Q8N998 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC89Q8N998 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC89Q8N998 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC89Q8N998 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC89Q8N998 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC89Q8N998 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC89Q8N998 AC116562.2-201ENST00000507042 360 ntBASIC19.01■□□□□ 0.63
CCDC89Q8N998 AC097488.1-201ENST00000507834 756 ntBASIC19.01■□□□□ 0.63
CCDC89Q8N998 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC89Q8N998 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC89Q8N998 AP001412.1-201ENST00000608405 714 ntBASIC19.01■□□□□ 0.63
CCDC89Q8N998 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC89Q8N998 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC89Q8N998 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC89Q8N998 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC89Q8N998 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC89Q8N998 LINC00896-202ENST00000609602 2128 ntBASIC19.01■□□□□ 0.63
CCDC89Q8N998 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC89Q8N998 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC89Q8N998 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC89Q8N998 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC89Q8N998 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC89Q8N998 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC89Q8N998 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC89Q8N998 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19■□□□□ 0.63
CCDC89Q8N998 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC89Q8N998 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC89Q8N998 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC89Q8N998 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC89Q8N998 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
CCDC89Q8N998 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CCDC89Q8N998 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CCDC89Q8N998 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC89Q8N998 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC89Q8N998 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC89Q8N998 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC89Q8N998 PRORSD1P-201ENST00000295112 541 ntBASIC19■□□□□ 0.63
CCDC89Q8N998 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC89Q8N998 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC89Q8N998 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19■□□□□ 0.63
CCDC89Q8N998 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19■□□□□ 0.63
CCDC89Q8N998 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19■□□□□ 0.63
CCDC89Q8N998 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC89Q8N998 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC89Q8N998 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC89Q8N998 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC89Q8N998 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms