Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 AC018470.1-201ENST00000624790 3129 ntBASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 AC104390.1-201ENST00000555663 520 ntBASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSMEM1Q8N8F7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 MMP23A-201ENST00000234610 1017 ntBASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 SLC25A6P5-201ENST00000435663 894 ntBASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 AC112497.1-201ENST00000624824 639 ntBASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSMEM1Q8N8F7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LSMEM1Q8N8F7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LSMEM1Q8N8F7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LSMEM1Q8N8F7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LSMEM1Q8N8F7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LSMEM1Q8N8F7 AC138028.4-201ENST00000564984 1845 ntBASIC16.77■□□□□ 0.27
LSMEM1Q8N8F7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LSMEM1Q8N8F7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LSMEM1Q8N8F7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 CYP2D8P-201ENST00000433633 1490 ntBASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 TSPY15P-201ENST00000457163 923 ntBASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 NAPSB-206ENST00000562112 1266 ntBASIC16.76■□□□□ 0.27
LSMEM1Q8N8F7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms