Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
TRAM1L1Q8N609 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 AL390719.2-201ENST00000606993 987 ntBASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRAM1L1Q8N609 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 AC009113.1-201ENST00000570267 2443 ntBASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 AL020996.1-203ENST00000536896 2307 ntBASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAM1L1Q8N609 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 Z83836.1-201ENST00000624605 1642 ntBASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 AC004263.2-201ENST00000617183 678 ntBASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAM1L1Q8N609 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms