Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SYNPOQ8N3V7 AC141586.3-201ENST00000562166 1838 ntBASIC18.58■□□□□ 0.56
SYNPOQ8N3V7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SYNPOQ8N3V7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.58■□□□□ 0.56
SYNPOQ8N3V7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SYNPOQ8N3V7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 AL163051.1-201ENST00000569214 1512 ntBASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SYNPOQ8N3V7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 AC138932.1-201ENST00000534164 6830 ntBASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 AC096582.2-201ENST00000510860 516 ntBASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 AC106730.1-201ENST00000566722 1090 ntBASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 AC008608.2-201ENST00000606089 416 ntBASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SYNPOQ8N3V7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 RBM17P3-201ENST00000417687 1192 ntBASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 AC132008.2-207ENST00000454517 770 ntBASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNPOQ8N3V7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 HEIH-201ENST00000623091 1652 ntBASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 AL357033.4-201ENST00000617703 1807 ntBASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms