Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 RPS15P9-201ENST00000494093 319 ntBASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 AC096734.2-201ENST00000562054 433 ntBASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 AC116407.2-201ENST00000613639 860 ntBASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 AC068587.9-201ENST00000641814 219 ntBASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 AL163051.1-201ENST00000569214 1512 ntBASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 SPDYE21P-201ENST00000413323 827 ntBASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 SLC25A6P5-201ENST00000435663 894 ntBASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 AC074386.1-202ENST00000463561 864 ntBASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 AL358472.5-202ENST00000641448 1267 ntBASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LTBP4Q8N2S1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 NME2P1-201ENST00000426182 414 ntBASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 U91328.1-201ENST00000437528 223 ntBASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 MIR6799-201ENST00000620297 69 ntBASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LTBP4Q8N2S1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 KRT18P41-201ENST00000518924 1277 ntBASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 AL596325.1-201ENST00000563991 1082 ntBASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LTBP4Q8N2S1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 COQ6-210ENST00000554920 649 ntTSL 3 BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 CNN2P2-201ENST00000443536 909 ntBASIC25.26■■□□□ 1.63
LTBP4Q8N2S1 CNN2P3-201ENST00000450201 906 ntBASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms