Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 AC005336.2-201ENST00000593183 939 ntBASIC19.77■□□□□ 0.76
HERC6Q8IVU3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 AP001269.4-201ENST00000609611 512 ntBASIC19.77■□□□□ 0.76
HERC6Q8IVU3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 Z98044.1-201ENST00000632503 1764 ntBASIC19.77■□□□□ 0.76
HERC6Q8IVU3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
HERC6Q8IVU3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
HERC6Q8IVU3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
HERC6Q8IVU3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 HMGN1P19-201ENST00000436976 333 ntBASIC19.76■□□□□ 0.75
HERC6Q8IVU3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 IGHV3-22-201ENST00000520721 359 ntBASIC19.76■□□□□ 0.75
HERC6Q8IVU3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 AL357033.4-201ENST00000617703 1807 ntBASIC19.76■□□□□ 0.75
HERC6Q8IVU3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERC6Q8IVU3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 AC087289.5-201ENST00000586076 3175 ntBASIC19.75■□□□□ 0.75
HERC6Q8IVU3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 AC112777.1-201ENST00000540175 1423 ntBASIC19.75■□□□□ 0.75
HERC6Q8IVU3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERC6Q8IVU3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERC6Q8IVU3 UPF3AP3-201ENST00000420996 769 ntBASIC19.74■□□□□ 0.75
HERC6Q8IVU3 MED15P5-201ENST00000423150 992 ntBASIC19.74■□□□□ 0.75
HERC6Q8IVU3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms