Protein–RNA interactions for Protein: Q6X4T0

C12orf54, Uncharacterized protein C12orf54, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54Q6X4T0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
C12orf54Q6X4T0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.8□□□□□ -0.04
C12orf54Q6X4T0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 AC090616.6-201ENST00000582640 721 ntBASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
C12orf54Q6X4T0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 AP001271.2-201ENST00000624018 1556 ntBASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 LINC00167-201ENST00000530583 1419 ntBASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 MIR662-201ENST00000384847 95 ntBASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 TSPY12P-201ENST00000421279 868 ntBASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 HLA-F-220ENST00000434407 884 ntBASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 SAPCD2P3-201ENST00000455031 850 ntBASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 TERC-201ENST00000602385 541 ntBASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 PLK5-205ENST00000642079 1969 ntBASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C12orf54Q6X4T0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.77□□□□□ -0.04
C12orf54Q6X4T0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf54Q6X4T0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.77□□□□□ -0.04
C12orf54Q6X4T0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
C12orf54Q6X4T0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf54Q6X4T0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf54Q6X4T0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
C12orf54Q6X4T0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf54Q6X4T0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf54Q6X4T0 PMS2P7-201ENST00000506558 1336 ntBASIC14.77□□□□□ -0.04
C12orf54Q6X4T0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf54Q6X4T0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
C12orf54Q6X4T0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
C12orf54Q6X4T0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C12orf54Q6X4T0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
C12orf54Q6X4T0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C12orf54Q6X4T0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C12orf54Q6X4T0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
C12orf54Q6X4T0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms