Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 MYC-208ENST00000641036 567 ntBASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
KCNIP4Q6PIL6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
KCNIP4Q6PIL6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
KCNIP4Q6PIL6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
KCNIP4Q6PIL6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
KCNIP4Q6PIL6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
KCNIP4Q6PIL6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.21□□□□□ -0.14
KCNIP4Q6PIL6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
KCNIP4Q6PIL6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
KCNIP4Q6PIL6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
KCNIP4Q6PIL6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
KCNIP4Q6PIL6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
KCNIP4Q6PIL6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.21□□□□□ -0.14
KCNIP4Q6PIL6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
KCNIP4Q6PIL6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
KCNIP4Q6PIL6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 AC034268.1-201ENST00000441047 882 ntBASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 REXO1L9P-201ENST00000604264 2108 ntBASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP4Q6PIL6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 AL513477.1-201ENST00000602865 2407 ntBASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP4Q6PIL6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms