Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
MRPL54Q6P161 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
MRPL54Q6P161 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
MRPL54Q6P161 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MRPL54Q6P161 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
MRPL54Q6P161 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.85□□□□□ -0.19
MRPL54Q6P161 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.85□□□□□ -0.19
MRPL54Q6P161 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
MRPL54Q6P161 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.85□□□□□ -0.19
MRPL54Q6P161 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
MRPL54Q6P161 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 AC027612.3-201ENST00000413684 1047 ntBASIC13.85□□□□□ -0.19
MRPL54Q6P161 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.85□□□□□ -0.19
MRPL54Q6P161 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.85□□□□□ -0.19
MRPL54Q6P161 AC096631.2-201ENST00000436136 790 ntBASIC13.85□□□□□ -0.19
MRPL54Q6P161 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.85□□□□□ -0.19
MRPL54Q6P161 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
MRPL54Q6P161 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.85□□□□□ -0.19
MRPL54Q6P161 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.85□□□□□ -0.19
MRPL54Q6P161 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.85□□□□□ -0.19
MRPL54Q6P161 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.85□□□□□ -0.19
MRPL54Q6P161 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.85□□□□□ -0.19
MRPL54Q6P161 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL54Q6P161 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.85□□□□□ -0.19
MRPL54Q6P161 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 CYP2T3P-201ENST00000601990 817 ntBASIC13.84□□□□□ -0.19
MRPL54Q6P161 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 AL136967.2-201ENST00000623968 743 ntBASIC13.84□□□□□ -0.19
MRPL54Q6P161 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
MRPL54Q6P161 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL54Q6P161 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms