Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 MKNK2P1-201ENST00000437526 628 ntBASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 IRX1P1-201ENST00000438849 1838 ntBASIC18.79■□□□□ 0.6
PTCRAQ6ISU1 ELL2P1-201ENST00000413990 1906 ntBASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 MIR149-201ENST00000384879 89 ntBASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 AC093028.1-201ENST00000622998 982 ntBASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 AL022326.1-202ENST00000641533 845 ntBASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 AP000867.4-201ENST00000641616 219 ntBASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 TCF3P1-201ENST00000423021 1937 ntBASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCRAQ6ISU1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 AC073621.1-201ENST00000392730 636 ntBASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 AC136632.2-201ENST00000512891 861 ntBASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.77■□□□□ 0.6
PTCRAQ6ISU1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTCRAQ6ISU1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.77■□□□□ 0.59
PTCRAQ6ISU1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.77■□□□□ 0.59
PTCRAQ6ISU1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTCRAQ6ISU1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PTCRAQ6ISU1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCRAQ6ISU1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PTCRAQ6ISU1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PTCRAQ6ISU1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.76■□□□□ 0.59
PTCRAQ6ISU1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTCRAQ6ISU1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTCRAQ6ISU1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PTCRAQ6ISU1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.76■□□□□ 0.59
PTCRAQ6ISU1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms