Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 CALY-202ENST00000368555 783 ntTSL 2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 MIR4751-201ENST00000578027 74 ntBASIC9.94□□□□□ -0.82
UBR4Q5T4S7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 TMPRSS11CP-201ENST00000453277 683 ntBASIC9.94□□□□□ -0.82
UBR4Q5T4S7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 AL512384.1-201ENST00000406683 331 ntBASIC9.93□□□□□ -0.82
UBR4Q5T4S7 BNIP3P42-201ENST00000454982 569 ntBASIC9.93□□□□□ -0.82
UBR4Q5T4S7 TP53TG3HP-202ENST00000569755 579 ntBASIC9.93□□□□□ -0.82
UBR4Q5T4S7 BNIP3P29-201ENST00000598302 571 ntBASIC9.93□□□□□ -0.82
UBR4Q5T4S7 AC011447.5-201ENST00000616168 564 ntBASIC9.93□□□□□ -0.82
UBR4Q5T4S7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 AC008677.1-201ENST00000519230 1561 ntBASIC9.93□□□□□ -0.82
UBR4Q5T4S7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 GPS2P2-201ENST00000430745 888 ntBASIC9.93□□□□□ -0.82
UBR4Q5T4S7 AC022210.1-201ENST00000449856 793 ntBASIC9.93□□□□□ -0.82
UBR4Q5T4S7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 RAB43P1-201ENST00000561790 589 ntBASIC9.93□□□□□ -0.82
UBR4Q5T4S7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 AL136301.1-201ENST00000615830 422 ntBASIC9.93□□□□□ -0.82
UBR4Q5T4S7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 SPTLC1P1-201ENST00000447199 261 ntBASIC9.93□□□□□ -0.82
UBR4Q5T4S7 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 AC125807.1-201ENST00000483097 614 ntBASIC9.93□□□□□ -0.82
UBR4Q5T4S7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC9.93□□□□□ -0.82
UBR4Q5T4S7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
UBR4Q5T4S7 IGHV3-65-201ENST00000523210 341 ntBASIC9.92□□□□□ -0.82
UBR4Q5T4S7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms