Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC051619.7-201ENST00000568314 623 ntBASIC11.28□□□□□ -0.6
HSPG2P98160 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
HSPG2P98160 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC11.28□□□□□ -0.6
HSPG2P98160 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.28□□□□□ -0.6
HSPG2P98160 AC006557.2-201ENST00000592985 1240 ntBASIC11.28□□□□□ -0.6
HSPG2P98160 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC11.28□□□□□ -0.6
HSPG2P98160 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC11.28□□□□□ -0.6
HSPG2P98160 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
HSPG2P98160 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC11.28□□□□□ -0.6
HSPG2P98160 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
HSPG2P98160 AL163051.1-201ENST00000569214 1512 ntBASIC11.28□□□□□ -0.6
HSPG2P98160 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.28□□□□□ -0.6
HSPG2P98160 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC11.28□□□□□ -0.6
HSPG2P98160 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC11.28□□□□□ -0.6
HSPG2P98160 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
HSPG2P98160 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.28□□□□□ -0.6
HSPG2P98160 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC11.28□□□□□ -0.6
HSPG2P98160 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC11.28□□□□□ -0.6
HSPG2P98160 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
HSPG2P98160 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC11.28□□□□□ -0.6
HSPG2P98160 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.28□□□□□ -0.6
HSPG2P98160 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.28□□□□□ -0.6
HSPG2P98160 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HSPG2P98160 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
HSPG2P98160 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
HSPG2P98160 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HSPG2P98160 AP002414.1-201ENST00000391405 1147 ntBASIC11.27□□□□□ -0.6
HSPG2P98160 ELK2BP-201ENST00000415014 1224 ntBASIC11.27□□□□□ -0.6
HSPG2P98160 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.27□□□□□ -0.6
HSPG2P98160 AC022145.2-201ENST00000598203 171 ntBASIC11.27□□□□□ -0.6
HSPG2P98160 AC009154.2-201ENST00000621177 724 ntBASIC11.27□□□□□ -0.6
HSPG2P98160 AC008761.3-201ENST00000624803 892 ntBASIC11.27□□□□□ -0.6
HSPG2P98160 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HSPG2P98160 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
HSPG2P98160 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HSPG2P98160 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HSPG2P98160 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC11.27□□□□□ -0.61
HSPG2P98160 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC11.27□□□□□ -0.61
HSPG2P98160 Z98044.1-201ENST00000632503 1764 ntBASIC11.27□□□□□ -0.61
HSPG2P98160 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HSPG2P98160 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HSPG2P98160 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HSPG2P98160 ARSEP1-201ENST00000420443 635 ntBASIC11.27□□□□□ -0.61
HSPG2P98160 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC11.27□□□□□ -0.61
HSPG2P98160 ADH5P3-201ENST00000433842 1137 ntBASIC11.27□□□□□ -0.61
HSPG2P98160 AP000344.2-201ENST00000512987 629 ntBASIC11.27□□□□□ -0.61
HSPG2P98160 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HSPG2P98160 MIR6752-201ENST00000618442 71 ntBASIC11.27□□□□□ -0.61
HSPG2P98160 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HSPG2P98160 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.61
HSPG2P98160 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HSPG2P98160 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HSPG2P98160 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HSPG2P98160 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC11.27□□□□□ -0.61
HSPG2P98160 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.27□□□□□ -0.61
HSPG2P98160 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HSPG2P98160 AC236430.1-201ENST00000402231 743 ntBASIC11.27□□□□□ -0.61
HSPG2P98160 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HSPG2P98160 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC11.27□□□□□ -0.61
HSPG2P98160 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.27□□□□□ -0.61
HSPG2P98160 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.27□□□□□ -0.61
HSPG2P98160 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.27□□□□□ -0.61
HSPG2P98160 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
HSPG2P98160 LINC01126-201ENST00000623515 1646 ntBASIC11.27□□□□□ -0.61
HSPG2P98160 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HSPG2P98160 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
HSPG2P98160 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
HSPG2P98160 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11.26□□□□□ -0.61
HSPG2P98160 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.26□□□□□ -0.61
HSPG2P98160 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC11.26□□□□□ -0.61
HSPG2P98160 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.26□□□□□ -0.61
HSPG2P98160 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.26□□□□□ -0.61
HSPG2P98160 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.26□□□□□ -0.61
HSPG2P98160 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.26□□□□□ -0.61
HSPG2P98160 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms