Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
H3F3AP84243 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.38■□□□□ 0.21
H3F3AP84243 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.38■□□□□ 0.21
H3F3AP84243 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.38■□□□□ 0.21
H3F3AP84243 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.38■□□□□ 0.21
H3F3AP84243 BICD1-207ENST00000551848 1962 ntBASIC16.38■□□□□ 0.21
H3F3AP84243 ESPNP-201ENST00000270691 2015 ntBASIC16.38■□□□□ 0.21
H3F3AP84243 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3AP84243 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H3F3AP84243 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.38■□□□□ 0.21
H3F3AP84243 AL391807.1-203ENST00000604392 2365 ntBASIC16.37■□□□□ 0.21
H3F3AP84243 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H3F3AP84243 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.37■□□□□ 0.21
H3F3AP84243 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H3F3AP84243 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H3F3AP84243 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
H3F3AP84243 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H3F3AP84243 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H3F3AP84243 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H3F3AP84243 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.37■□□□□ 0.21
H3F3AP84243 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H3F3AP84243 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.37■□□□□ 0.21
H3F3AP84243 AL359075.1-203ENST00000462729 1002 ntBASIC16.37■□□□□ 0.21
H3F3AP84243 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H3F3AP84243 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.37■□□□□ 0.21
H3F3AP84243 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.37■□□□□ 0.21
H3F3AP84243 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.37■□□□□ 0.21
H3F3AP84243 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.37■□□□□ 0.21
H3F3AP84243 AL049597.2-201ENST00000565575 961 ntBASIC16.37■□□□□ 0.21
H3F3AP84243 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
H3F3AP84243 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H3F3AP84243 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H3F3AP84243 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H3F3AP84243 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.37■□□□□ 0.21
H3F3AP84243 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H3F3AP84243 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H3F3AP84243 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.37■□□□□ 0.21
H3F3AP84243 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
H3F3AP84243 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H3F3AP84243 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.36■□□□□ 0.21
H3F3AP84243 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
H3F3AP84243 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
H3F3AP84243 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
H3F3AP84243 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.36■□□□□ 0.21
H3F3AP84243 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 AC093677.2-201ENST00000600169 1863 ntBASIC16.36■□□□□ 0.21
H3F3AP84243 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 HBZP1-201ENST00000354915 429 ntBASIC16.36■□□□□ 0.21
H3F3AP84243 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.36■□□□□ 0.21
H3F3AP84243 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.36■□□□□ 0.21
H3F3AP84243 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 AC092597.1-201ENST00000487352 616 ntBASIC16.36■□□□□ 0.21
H3F3AP84243 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.36■□□□□ 0.21
H3F3AP84243 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.36■□□□□ 0.21
H3F3AP84243 AL136038.4-201ENST00000603606 1261 ntBASIC16.36■□□□□ 0.21
H3F3AP84243 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.36■□□□□ 0.21
H3F3AP84243 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
H3F3AP84243 LINC01126-201ENST00000623515 1646 ntBASIC16.36■□□□□ 0.21
H3F3AP84243 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
H3F3AP84243 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
H3F3AP84243 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3F3AP84243 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.35■□□□□ 0.21
H3F3AP84243 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3AP84243 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.35■□□□□ 0.21
H3F3AP84243 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
H3F3AP84243 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.35■□□□□ 0.21
H3F3AP84243 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3AP84243 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3AP84243 AC112907.2-201ENST00000448639 330 ntBASIC16.35■□□□□ 0.21
H3F3AP84243 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.35■□□□□ 0.21
H3F3AP84243 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.35■□□□□ 0.21
H3F3AP84243 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3AP84243 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3AP84243 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3AP84243 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
H3F3AP84243 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3AP84243 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.35■□□□□ 0.21
H3F3AP84243 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3AP84243 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3AP84243 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3AP84243 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3AP84243 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3AP84243 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
H3F3AP84243 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3F3AP84243 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.35■□□□□ 0.21
H3F3AP84243 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms