Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VSX2P58304 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VSX2P58304 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.53■□□□□ 0.4
VSX2P58304 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.52■□□□□ 0.4
VSX2P58304 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
VSX2P58304 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VSX2P58304 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.52■□□□□ 0.4
VSX2P58304 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.52■□□□□ 0.4
VSX2P58304 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VSX2P58304 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.4
VSX2P58304 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VSX2P58304 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VSX2P58304 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VSX2P58304 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VSX2P58304 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.52■□□□□ 0.4
VSX2P58304 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.52■□□□□ 0.4
VSX2P58304 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.52■□□□□ 0.4
VSX2P58304 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
VSX2P58304 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
VSX2P58304 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.52■□□□□ 0.4
VSX2P58304 AC116407.4-201ENST00000623319 1061 ntBASIC17.52■□□□□ 0.4
VSX2P58304 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VSX2P58304 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VSX2P58304 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VSX2P58304 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VSX2P58304 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VSX2P58304 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
VSX2P58304 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VSX2P58304 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VSX2P58304 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
VSX2P58304 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VSX2P58304 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VSX2P58304 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
VSX2P58304 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VSX2P58304 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
VSX2P58304 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
VSX2P58304 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VSX2P58304 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VSX2P58304 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VSX2P58304 MIR662-201ENST00000384847 95 ntBASIC17.51■□□□□ 0.39
VSX2P58304 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.51■□□□□ 0.39
VSX2P58304 UPK3BP1-201ENST00000428678 509 ntBASIC17.51■□□□□ 0.39
VSX2P58304 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.51■□□□□ 0.39
VSX2P58304 AL162741.1-201ENST00000565563 1558 ntBASIC17.51■□□□□ 0.39
VSX2P58304 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.51■□□□□ 0.39
VSX2P58304 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VSX2P58304 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VSX2P58304 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VSX2P58304 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
VSX2P58304 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VSX2P58304 SDHAP2-201ENST00000455183 2001 ntBASIC17.5■□□□□ 0.39
VSX2P58304 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VSX2P58304 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VSX2P58304 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
VSX2P58304 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VSX2P58304 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
VSX2P58304 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VSX2P58304 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
VSX2P58304 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VSX2P58304 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.5■□□□□ 0.39
VSX2P58304 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.5■□□□□ 0.39
VSX2P58304 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
VSX2P58304 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.5■□□□□ 0.39
VSX2P58304 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VSX2P58304 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.5■□□□□ 0.39
VSX2P58304 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.5■□□□□ 0.39
VSX2P58304 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VSX2P58304 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.5■□□□□ 0.39
VSX2P58304 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VSX2P58304 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.5■□□□□ 0.39
VSX2P58304 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VSX2P58304 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.5■□□□□ 0.39
VSX2P58304 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
VSX2P58304 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VSX2P58304 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
VSX2P58304 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VSX2P58304 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
VSX2P58304 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
VSX2P58304 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.5■□□□□ 0.39
VSX2P58304 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.5■□□□□ 0.39
VSX2P58304 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.49■□□□□ 0.39
VSX2P58304 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.49■□□□□ 0.39
VSX2P58304 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.49■□□□□ 0.39
VSX2P58304 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
VSX2P58304 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VSX2P58304 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
VSX2P58304 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.49■□□□□ 0.39
VSX2P58304 NEFHP1-201ENST00000412845 2629 ntBASIC17.49■□□□□ 0.39
VSX2P58304 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.49■□□□□ 0.39
VSX2P58304 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 KRT18P48-201ENST00000434763 852 ntBASIC17.49■□□□□ 0.39
VSX2P58304 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VSX2P58304 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.49■□□□□ 0.39
VSX2P58304 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms