Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.83■□□□□ 0.45
AP1S2P56377 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S2P56377 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
AP1S2P56377 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S2P56377 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S2P56377 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S2P56377 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.83■□□□□ 0.45
AP1S2P56377 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
AP1S2P56377 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.83■□□□□ 0.45
AP1S2P56377 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S2P56377 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
AP1S2P56377 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
AP1S2P56377 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.83■□□□□ 0.44
AP1S2P56377 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
AP1S2P56377 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.83■□□□□ 0.44
AP1S2P56377 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP1S2P56377 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP1S2P56377 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP1S2P56377 AL137013.1-201ENST00000432946 1228 ntBASIC17.83■□□□□ 0.44
AP1S2P56377 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.83■□□□□ 0.44
AP1S2P56377 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP1S2P56377 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
AP1S2P56377 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.83■□□□□ 0.44
AP1S2P56377 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.83■□□□□ 0.44
AP1S2P56377 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.83■□□□□ 0.44
AP1S2P56377 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.83■□□□□ 0.44
AP1S2P56377 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
AP1S2P56377 AC010203.1-204ENST00000548782 407 ntBASIC17.83■□□□□ 0.44
AP1S2P56377 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.83■□□□□ 0.44
AP1S2P56377 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.83■□□□□ 0.44
AP1S2P56377 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.83■□□□□ 0.44
AP1S2P56377 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.83■□□□□ 0.44
AP1S2P56377 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
AP1S2P56377 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP1S2P56377 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP1S2P56377 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP1S2P56377 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.82■□□□□ 0.44
AP1S2P56377 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
AP1S2P56377 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.82■□□□□ 0.44
AP1S2P56377 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.82■□□□□ 0.44
AP1S2P56377 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 PHGDH-209ENST00000641074 1780 ntBASIC17.82■□□□□ 0.44
AP1S2P56377 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.82■□□□□ 0.44
AP1S2P56377 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.82■□□□□ 0.44
AP1S2P56377 COX11P1-201ENST00000489116 835 ntBASIC17.82■□□□□ 0.44
AP1S2P56377 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
AP1S2P56377 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.82■□□□□ 0.44
AP1S2P56377 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.82■□□□□ 0.44
AP1S2P56377 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.82■□□□□ 0.44
AP1S2P56377 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
AP1S2P56377 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
AP1S2P56377 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
AP1S2P56377 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.82■□□□□ 0.44
AP1S2P56377 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP1S2P56377 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S2P56377 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S2P56377 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S2P56377 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
AP1S2P56377 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.81■□□□□ 0.44
AP1S2P56377 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S2P56377 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S2P56377 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
AP1S2P56377 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S2P56377 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
AP1S2P56377 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S2P56377 TERF1P1-201ENST00000311003 1181 ntBASIC17.81■□□□□ 0.44
AP1S2P56377 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.81■□□□□ 0.44
AP1S2P56377 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S2P56377 BX664615.1-201ENST00000443558 458 ntBASIC17.81■□□□□ 0.44
AP1S2P56377 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.81■□□□□ 0.44
AP1S2P56377 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.81■□□□□ 0.44
AP1S2P56377 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
AP1S2P56377 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
AP1S2P56377 AC140113.3-201ENST00000605663 199 ntBASIC17.81■□□□□ 0.44
AP1S2P56377 LINC01023-201ENST00000606054 436 ntBASIC17.81■□□□□ 0.44
AP1S2P56377 NOC2LP1-202ENST00000452600 2235 ntBASIC17.81■□□□□ 0.44
AP1S2P56377 AL024508.2-201ENST00000607749 1894 ntBASIC17.81■□□□□ 0.44
AP1S2P56377 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S2P56377 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms