Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 DGCR10-201ENST00000609839 495 ntBASIC16.28■□□□□ 0.2
SRP9P49458 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SRP9P49458 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SRP9P49458 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.28■□□□□ 0.2
SRP9P49458 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SRP9P49458 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRP9P49458 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRP9P49458 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.27■□□□□ 0.2
SRP9P49458 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SRP9P49458 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRP9P49458 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
SRP9P49458 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.27■□□□□ 0.2
SRP9P49458 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRP9P49458 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SRP9P49458 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRP9P49458 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SRP9P49458 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRP9P49458 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.27■□□□□ 0.2
SRP9P49458 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.27■□□□□ 0.2
SRP9P49458 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.27■□□□□ 0.2
SRP9P49458 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.27■□□□□ 0.2
SRP9P49458 REXO1L10P-201ENST00000615707 1290 ntBASIC16.27■□□□□ 0.2
SRP9P49458 AC130371.2-201ENST00000619443 611 ntBASIC16.27■□□□□ 0.2
SRP9P49458 REXO1L12P-201ENST00000622156 912 ntBASIC16.27■□□□□ 0.2
SRP9P49458 AC083906.6-201ENST00000641366 219 ntBASIC16.27■□□□□ 0.2
SRP9P49458 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRP9P49458 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.27■□□□□ 0.2
SRP9P49458 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRP9P49458 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRP9P49458 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.27■□□□□ 0.19
SRP9P49458 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRP9P49458 FEM1AP3-201ENST00000403722 1741 ntBASIC16.27■□□□□ 0.19
SRP9P49458 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
SRP9P49458 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRP9P49458 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRP9P49458 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SRP9P49458 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SRP9P49458 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SRP9P49458 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.27■□□□□ 0.19
SRP9P49458 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.27■□□□□ 0.19
SRP9P49458 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRP9P49458 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRP9P49458 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.27■□□□□ 0.19
SRP9P49458 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.26■□□□□ 0.19
SRP9P49458 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SRP9P49458 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SRP9P49458 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.26■□□□□ 0.19
SRP9P49458 KRT8P41-201ENST00000533985 1514 ntBASIC16.26■□□□□ 0.19
SRP9P49458 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 UNC93B2-201ENST00000285383 730 ntBASIC16.26■□□□□ 0.19
SRP9P49458 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.26■□□□□ 0.19
SRP9P49458 AL596275.1-201ENST00000423464 877 ntBASIC16.26■□□□□ 0.19
SRP9P49458 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.26■□□□□ 0.19
SRP9P49458 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 AC011506.1-201ENST00000474329 610 ntBASIC16.26■□□□□ 0.19
SRP9P49458 AC091390.4-202ENST00000476426 537 ntBASIC16.26■□□□□ 0.19
SRP9P49458 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SRP9P49458 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.26■□□□□ 0.19
SRP9P49458 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.26■□□□□ 0.19
SRP9P49458 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.26■□□□□ 0.19
SRP9P49458 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
SRP9P49458 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SRP9P49458 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.26■□□□□ 0.19
SRP9P49458 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.26■□□□□ 0.19
SRP9P49458 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SRP9P49458 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.26■□□□□ 0.19
SRP9P49458 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRP9P49458 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SRP9P49458 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRP9P49458 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.25■□□□□ 0.19
SRP9P49458 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.25■□□□□ 0.19
SRP9P49458 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms