Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
KRT6CP48668 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT6CP48668 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6CP48668 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6CP48668 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6CP48668 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT6CP48668 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.77■□□□□ 0.44
KRT6CP48668 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT6CP48668 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT6CP48668 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT6CP48668 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
KRT6CP48668 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
KRT6CP48668 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT6CP48668 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
KRT6CP48668 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
KRT6CP48668 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT6CP48668 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT6CP48668 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT6CP48668 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
KRT6CP48668 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.77■□□□□ 0.44
KRT6CP48668 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.77■□□□□ 0.44
KRT6CP48668 AP003041.3-201ENST00000527151 707 ntBASIC17.77■□□□□ 0.44
KRT6CP48668 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT6CP48668 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT6CP48668 HOXB1-202ENST00000577092 1414 ntBASIC17.77■□□□□ 0.44
KRT6CP48668 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT6CP48668 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.77■□□□□ 0.43
KRT6CP48668 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT6CP48668 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.77■□□□□ 0.43
KRT6CP48668 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.77■□□□□ 0.43
KRT6CP48668 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
KRT6CP48668 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6CP48668 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
KRT6CP48668 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
KRT6CP48668 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6CP48668 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6CP48668 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT6CP48668 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT6CP48668 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6CP48668 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KRT6CP48668 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KRT6CP48668 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6CP48668 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
KRT6CP48668 TSPY7P-201ENST00000431358 1114 ntBASIC17.76■□□□□ 0.43
KRT6CP48668 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.76■□□□□ 0.43
KRT6CP48668 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6CP48668 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
KRT6CP48668 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT6CP48668 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.76■□□□□ 0.43
KRT6CP48668 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT6CP48668 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6CP48668 AP006294.2-201ENST00000641667 209 ntBASIC17.76■□□□□ 0.43
KRT6CP48668 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
KRT6CP48668 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6CP48668 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6CP48668 AL163051.1-201ENST00000569214 1512 ntBASIC17.76■□□□□ 0.43
KRT6CP48668 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6CP48668 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT6CP48668 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6CP48668 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KRT6CP48668 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6CP48668 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KRT6CP48668 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6CP48668 FZD10-202ENST00000539839 3282 ntBASIC17.76■□□□□ 0.43
KRT6CP48668 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
KRT6CP48668 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6CP48668 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT6CP48668 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT6CP48668 KRT18P23-201ENST00000435622 1283 ntBASIC17.75■□□□□ 0.43
KRT6CP48668 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT6CP48668 BX088651.1-201ENST00000540551 451 ntBASIC17.75■□□□□ 0.43
KRT6CP48668 FITM1-202ENST00000559294 800 ntBASIC17.75■□□□□ 0.43
KRT6CP48668 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT6CP48668 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.75■□□□□ 0.43
KRT6CP48668 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT6CP48668 TMEM191A-211ENST00000637163 1067 ntBASIC17.75■□□□□ 0.43
KRT6CP48668 AC116562.4-202ENST00000641738 218 ntBASIC17.75■□□□□ 0.43
KRT6CP48668 AC068880.1-201ENST00000507289 2297 ntBASIC17.75■□□□□ 0.43
KRT6CP48668 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
KRT6CP48668 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 AC009102.3-201ENST00000623118 1491 ntBASIC17.75■□□□□ 0.43
KRT6CP48668 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6CP48668 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms