Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC27.33■■□□□ 1.97
KDM5CP41229 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC27.33■■□□□ 1.96
KDM5CP41229 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
KDM5CP41229 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC27.33■■□□□ 1.96
KDM5CP41229 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
KDM5CP41229 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
KDM5CP41229 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
KDM5CP41229 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC27.32■■□□□ 1.96
KDM5CP41229 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC27.32■■□□□ 1.96
KDM5CP41229 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
KDM5CP41229 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC27.32■■□□□ 1.96
KDM5CP41229 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
KDM5CP41229 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC27.32■■□□□ 1.96
KDM5CP41229 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
KDM5CP41229 METTL21AP1-201ENST00000438852 635 ntBASIC27.32■■□□□ 1.96
KDM5CP41229 MIR3687-2-201ENST00000577708 61 ntBASIC27.32■■□□□ 1.96
KDM5CP41229 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC27.32■■□□□ 1.96
KDM5CP41229 MIR3687-1-201ENST00000614492 61 ntBASIC27.32■■□□□ 1.96
KDM5CP41229 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
KDM5CP41229 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
KDM5CP41229 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
KDM5CP41229 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC27.31■■□□□ 1.96
KDM5CP41229 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC27.31■■□□□ 1.96
KDM5CP41229 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
KDM5CP41229 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
KDM5CP41229 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
KDM5CP41229 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
KDM5CP41229 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC27.31■■□□□ 1.96
KDM5CP41229 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC27.31■■□□□ 1.96
KDM5CP41229 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC27.31■■□□□ 1.96
KDM5CP41229 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC27.31■■□□□ 1.96
KDM5CP41229 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
KDM5CP41229 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
KDM5CP41229 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
KDM5CP41229 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
KDM5CP41229 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
KDM5CP41229 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
KDM5CP41229 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
KDM5CP41229 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
KDM5CP41229 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC27.31■■□□□ 1.96
KDM5CP41229 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
KDM5CP41229 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
KDM5CP41229 BEX3-201ENST00000361298 921 ntTSL 2 BASIC27.31■■□□□ 1.96
KDM5CP41229 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
KDM5CP41229 CYMP-203ENST00000474680 1263 ntBASIC27.31■■□□□ 1.96
KDM5CP41229 NKAPP1-205ENST00000585790 367 ntBASIC27.31■■□□□ 1.96
KDM5CP41229 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC27.31■■□□□ 1.96
KDM5CP41229 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC27.3■■□□□ 1.96
KDM5CP41229 SDHAP2-201ENST00000455183 2001 ntBASIC27.3■■□□□ 1.96
KDM5CP41229 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC27.3■■□□□ 1.96
KDM5CP41229 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC27.3■■□□□ 1.96
KDM5CP41229 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC27.3■■□□□ 1.96
KDM5CP41229 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
KDM5CP41229 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC27.3■■□□□ 1.96
KDM5CP41229 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
KDM5CP41229 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
KDM5CP41229 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC27.3■■□□□ 1.96
KDM5CP41229 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
KDM5CP41229 AC073621.1-201ENST00000392730 636 ntBASIC27.3■■□□□ 1.96
KDM5CP41229 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
KDM5CP41229 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC27.3■■□□□ 1.96
KDM5CP41229 AC073592.4-201ENST00000623827 446 ntBASIC27.3■■□□□ 1.96
KDM5CP41229 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC27.29■■□□□ 1.96
KDM5CP41229 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
KDM5CP41229 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KDM5CP41229 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC27.29■■□□□ 1.96
KDM5CP41229 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
KDM5CP41229 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
KDM5CP41229 INIP-202ENST00000374236 874 ntTSL 2 BASIC27.29■■□□□ 1.96
KDM5CP41229 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC27.29■■□□□ 1.96
KDM5CP41229 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC27.29■■□□□ 1.96
KDM5CP41229 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC27.29■■□□□ 1.96
KDM5CP41229 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC27.29■■□□□ 1.96
KDM5CP41229 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
KDM5CP41229 AC064836.3-201ENST00000607928 673 ntBASIC27.29■■□□□ 1.96
KDM5CP41229 AC083906.6-201ENST00000641366 219 ntBASIC27.29■■□□□ 1.96
KDM5CP41229 AC079781.4-201ENST00000641908 219 ntBASIC27.29■■□□□ 1.96
KDM5CP41229 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC27.29■■□□□ 1.96
KDM5CP41229 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KDM5CP41229 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KDM5CP41229 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
KDM5CP41229 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC27.28■■□□□ 1.96
KDM5CP41229 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KDM5CP41229 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KDM5CP41229 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
KDM5CP41229 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KDM5CP41229 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
KDM5CP41229 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
KDM5CP41229 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
KDM5CP41229 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KDM5CP41229 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC27.27■■□□□ 1.96
KDM5CP41229 AC079776.2-201ENST00000641154 1609 ntBASIC27.27■■□□□ 1.96
KDM5CP41229 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
KDM5CP41229 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC27.27■■□□□ 1.96
KDM5CP41229 LBH-203ENST00000404397 543 ntTSL 4 BASIC27.27■■□□□ 1.96
KDM5CP41229 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
KDM5CP41229 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
KDM5CP41229 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
KDM5CP41229 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
KDM5CP41229 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms