Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNNA1P35221 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNNA1P35221 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNNA1P35221 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.36■□□□□ 0.69
CTNNA1P35221 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNNA1P35221 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNNA1P35221 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.36■□□□□ 0.69
CTNNA1P35221 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CTNNA1P35221 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CTNNA1P35221 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNNA1P35221 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNNA1P35221 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTNNA1P35221 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CTNNA1P35221 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.36■□□□□ 0.69
CTNNA1P35221 AC034236.2-201ENST00000606662 1610 ntBASIC19.36■□□□□ 0.69
CTNNA1P35221 REXO1L9P-201ENST00000604264 2108 ntBASIC19.36■□□□□ 0.69
CTNNA1P35221 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.36■□□□□ 0.69
CTNNA1P35221 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.36■□□□□ 0.69
CTNNA1P35221 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.35■□□□□ 0.69
CTNNA1P35221 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CTNNA1P35221 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CTNNA1P35221 KRT8P50-201ENST00000562022 1438 ntBASIC19.35■□□□□ 0.69
CTNNA1P35221 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.35■□□□□ 0.69
CTNNA1P35221 AC134043.2-201ENST00000624206 2238 ntBASIC19.35■□□□□ 0.69
CTNNA1P35221 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNNA1P35221 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNNA1P35221 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.35■□□□□ 0.69
CTNNA1P35221 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.35■□□□□ 0.69
CTNNA1P35221 SLC25A6P5-201ENST00000435663 894 ntBASIC19.35■□□□□ 0.69
CTNNA1P35221 NUDT16P1-203ENST00000513809 620 ntBASIC19.35■□□□□ 0.69
CTNNA1P35221 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.35■□□□□ 0.69
CTNNA1P35221 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.35■□□□□ 0.69
CTNNA1P35221 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.35■□□□□ 0.69
CTNNA1P35221 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTNNA1P35221 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.35■□□□□ 0.69
CTNNA1P35221 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.35■□□□□ 0.69
CTNNA1P35221 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTNNA1P35221 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTNNA1P35221 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTNNA1P35221 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNNA1P35221 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNNA1P35221 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNNA1P35221 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.34■□□□□ 0.69
CTNNA1P35221 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
CTNNA1P35221 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CTNNA1P35221 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTNNA1P35221 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.34■□□□□ 0.69
CTNNA1P35221 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNNA1P35221 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CTNNA1P35221 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNNA1P35221 FAM201B-201ENST00000458407 597 ntBASIC19.34■□□□□ 0.69
CTNNA1P35221 CA15P1-201ENST00000481698 905 ntBASIC19.34■□□□□ 0.69
CTNNA1P35221 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.34■□□□□ 0.69
CTNNA1P35221 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.34■□□□□ 0.69
CTNNA1P35221 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.34■□□□□ 0.69
CTNNA1P35221 SLC25A1P4-201ENST00000567977 778 ntBASIC19.34■□□□□ 0.69
CTNNA1P35221 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CTNNA1P35221 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.34■□□□□ 0.69
CTNNA1P35221 GNAS-203ENST00000306120 1878 ntBASIC19.34■□□□□ 0.69
CTNNA1P35221 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNNA1P35221 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CTNNA1P35221 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNNA1P35221 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNNA1P35221 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNNA1P35221 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTNNA1P35221 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.34■□□□□ 0.69
CTNNA1P35221 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CTNNA1P35221 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNNA1P35221 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNNA1P35221 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNNA1P35221 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNNA1P35221 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNNA1P35221 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CTNNA1P35221 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CTNNA1P35221 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CTNNA1P35221 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.33■□□□□ 0.69
CTNNA1P35221 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTNNA1P35221 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.33■□□□□ 0.69
CTNNA1P35221 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTNNA1P35221 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.33■□□□□ 0.68
CTNNA1P35221 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTNNA1P35221 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.33■□□□□ 0.68
CTNNA1P35221 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.33■□□□□ 0.68
CTNNA1P35221 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CTNNA1P35221 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTNNA1P35221 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CTNNA1P35221 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTNNA1P35221 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTNNA1P35221 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.33■□□□□ 0.68
CTNNA1P35221 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTNNA1P35221 PRORSD1P-202ENST00000563365 2154 ntBASIC19.33■□□□□ 0.68
CTNNA1P35221 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTNNA1P35221 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.32■□□□□ 0.68
CTNNA1P35221 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CTNNA1P35221 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNNA1P35221 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNNA1P35221 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTNNA1P35221 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.32■□□□□ 0.68
CTNNA1P35221 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CTNNA1P35221 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms