Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTGFP29279 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTGFP29279 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CTGFP29279 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.58■□□□□ 0.89
CTGFP29279 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.58■□□□□ 0.89
CTGFP29279 HTR5BP-201ENST00000430851 1154 ntBASIC20.58■□□□□ 0.89
CTGFP29279 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTGFP29279 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTGFP29279 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTGFP29279 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.58■□□□□ 0.89
CTGFP29279 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
CTGFP29279 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.58■□□□□ 0.89
CTGFP29279 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTGFP29279 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.58■□□□□ 0.89
CTGFP29279 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.58■□□□□ 0.89
CTGFP29279 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CTGFP29279 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTGFP29279 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTGFP29279 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CTGFP29279 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.58■□□□□ 0.88
CTGFP29279 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CTGFP29279 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTGFP29279 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CTGFP29279 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTGFP29279 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTGFP29279 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CTGFP29279 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.57■□□□□ 0.88
CTGFP29279 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CTGFP29279 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.57■□□□□ 0.88
CTGFP29279 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CTGFP29279 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CTGFP29279 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTGFP29279 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTGFP29279 LINC01126-201ENST00000623515 1646 ntBASIC20.56■□□□□ 0.88
CTGFP29279 PCDHAC2-203ENST00000615316 3011 ntBASIC20.56■□□□□ 0.88
CTGFP29279 AC004817.3-201ENST00000602957 2129 ntBASIC20.56■□□□□ 0.88
CTGFP29279 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.56■□□□□ 0.88
CTGFP29279 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTGFP29279 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CTGFP29279 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTGFP29279 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTGFP29279 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTGFP29279 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.56■□□□□ 0.88
CTGFP29279 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CTGFP29279 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.56■□□□□ 0.88
CTGFP29279 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.56■□□□□ 0.88
CTGFP29279 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.56■□□□□ 0.88
CTGFP29279 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.56■□□□□ 0.88
CTGFP29279 AC005829.1-201ENST00000570002 483 ntBASIC20.56■□□□□ 0.88
CTGFP29279 MIR4469-201ENST00000583919 79 ntBASIC20.56■□□□□ 0.88
CTGFP29279 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.56■□□□□ 0.88
CTGFP29279 AC092865.6-201ENST00000642101 219 ntBASIC20.56■□□□□ 0.88
CTGFP29279 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CTGFP29279 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.56■□□□□ 0.88
CTGFP29279 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTGFP29279 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTGFP29279 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTGFP29279 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.56■□□□□ 0.88
CTGFP29279 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.56■□□□□ 0.88
CTGFP29279 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.55■□□□□ 0.88
CTGFP29279 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.55■□□□□ 0.88
CTGFP29279 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.55■□□□□ 0.88
CTGFP29279 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTGFP29279 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.55■□□□□ 0.88
CTGFP29279 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTGFP29279 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTGFP29279 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTGFP29279 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTGFP29279 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.55■□□□□ 0.88
CTGFP29279 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTGFP29279 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CTGFP29279 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.55■□□□□ 0.88
CTGFP29279 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.55■□□□□ 0.88
CTGFP29279 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
CTGFP29279 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.55■□□□□ 0.88
CTGFP29279 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.55■□□□□ 0.88
CTGFP29279 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.55■□□□□ 0.88
CTGFP29279 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.55■□□□□ 0.88
CTGFP29279 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.55■□□□□ 0.88
CTGFP29279 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.55■□□□□ 0.88
CTGFP29279 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.55■□□□□ 0.88
CTGFP29279 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTGFP29279 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CTGFP29279 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CTGFP29279 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTGFP29279 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.54■□□□□ 0.88
CTGFP29279 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTGFP29279 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTGFP29279 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CTGFP29279 AL158211.5-201ENST00000623583 2518 ntBASIC20.54■□□□□ 0.88
CTGFP29279 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTGFP29279 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.54■□□□□ 0.88
CTGFP29279 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTGFP29279 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.54■□□□□ 0.88
CTGFP29279 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.54■□□□□ 0.88
CTGFP29279 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.54■□□□□ 0.88
CTGFP29279 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTGFP29279 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.54■□□□□ 0.88
CTGFP29279 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CTGFP29279 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms