Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
RXRBP28702 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RXRBP28702 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RXRBP28702 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
RXRBP28702 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC23.88■■□□□ 1.41
RXRBP28702 IGHV3-65-201ENST00000523210 341 ntBASIC23.88■■□□□ 1.41
RXRBP28702 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC23.88■■□□□ 1.41
RXRBP28702 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
RXRBP28702 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC23.88■■□□□ 1.41
RXRBP28702 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC23.88■■□□□ 1.41
RXRBP28702 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
RXRBP28702 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RXRBP28702 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC23.88■■□□□ 1.41
RXRBP28702 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RXRBP28702 AC092902.6-201ENST00000641783 218 ntBASIC23.88■■□□□ 1.41
RXRBP28702 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RXRBP28702 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RXRBP28702 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RXRBP28702 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RXRBP28702 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RXRBP28702 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC23.87■■□□□ 1.41
RXRBP28702 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.87■■□□□ 1.41
RXRBP28702 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RXRBP28702 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RXRBP28702 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RXRBP28702 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RXRBP28702 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC23.87■■□□□ 1.41
RXRBP28702 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RXRBP28702 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
RXRBP28702 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
RXRBP28702 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC23.87■■□□□ 1.41
RXRBP28702 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RXRBP28702 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC23.87■■□□□ 1.41
RXRBP28702 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC23.87■■□□□ 1.41
RXRBP28702 AL589182.2-201ENST00000619332 1049 ntBASIC23.87■■□□□ 1.41
RXRBP28702 AC004706.3-202ENST00000621574 984 ntBASIC23.87■■□□□ 1.41
RXRBP28702 AC073592.5-201ENST00000624854 528 ntBASIC23.87■■□□□ 1.41
RXRBP28702 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RXRBP28702 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RXRBP28702 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC23.86■■□□□ 1.41
RXRBP28702 AC006504.4-201ENST00000592118 1568 ntBASIC23.86■■□□□ 1.41
RXRBP28702 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.86■■□□□ 1.41
RXRBP28702 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.86■■□□□ 1.41
RXRBP28702 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RXRBP28702 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC23.86■■□□□ 1.41
RXRBP28702 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC23.86■■□□□ 1.41
RXRBP28702 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RXRBP28702 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC23.86■■□□□ 1.41
RXRBP28702 ATP5G2P4-201ENST00000442175 420 ntBASIC23.86■■□□□ 1.41
RXRBP28702 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC23.86■■□□□ 1.41
RXRBP28702 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC23.86■■□□□ 1.41
RXRBP28702 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC23.86■■□□□ 1.41
RXRBP28702 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RXRBP28702 AC096734.2-201ENST00000562054 433 ntBASIC23.86■■□□□ 1.41
RXRBP28702 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC23.86■■□□□ 1.41
RXRBP28702 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
RXRBP28702 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RXRBP28702 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
RXRBP28702 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.85■■□□□ 1.41
RXRBP28702 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC23.85■■□□□ 1.41
RXRBP28702 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RXRBP28702 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RXRBP28702 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
RXRBP28702 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RXRBP28702 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RXRBP28702 AC008667.4-201ENST00000607370 168 ntBASIC23.85■■□□□ 1.41
RXRBP28702 AC010507.1-201ENST00000633895 436 ntBASIC23.85■■□□□ 1.41
RXRBP28702 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.85■■□□□ 1.41
RXRBP28702 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RXRBP28702 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC23.85■■□□□ 1.41
RXRBP28702 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RXRBP28702 PMPCAP1-201ENST00000508114 1576 ntBASIC23.85■■□□□ 1.41
RXRBP28702 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
RXRBP28702 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.85■■□□□ 1.41
RXRBP28702 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RXRBP28702 AL121761.2-201ENST00000598007 1648 ntBASIC23.84■■□□□ 1.41
RXRBP28702 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RXRBP28702 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC23.84■■□□□ 1.41
RXRBP28702 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RXRBP28702 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RXRBP28702 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.84■■□□□ 1.41
RXRBP28702 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.84■■□□□ 1.41
RXRBP28702 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
RXRBP28702 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RXRBP28702 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC23.84■■□□□ 1.41
RXRBP28702 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
RXRBP28702 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC23.84■■□□□ 1.41
RXRBP28702 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC23.84■■□□□ 1.41
RXRBP28702 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC23.84■■□□□ 1.41
RXRBP28702 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RXRBP28702 AL353135.1-201ENST00000606729 504 ntBASIC23.84■■□□□ 1.41
RXRBP28702 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC23.84■■□□□ 1.41
RXRBP28702 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RXRBP28702 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC23.84■■□□□ 1.41
RXRBP28702 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RXRBP28702 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RXRBP28702 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC23.83■■□□□ 1.41
RXRBP28702 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.83■■□□□ 1.41
RXRBP28702 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RXRBP28702 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms