Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MSR1P21757 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSR1P21757 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MSR1P21757 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSR1P21757 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSR1P21757 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSR1P21757 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSR1P21757 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.2■□□□□ 0.18
MSR1P21757 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MSR1P21757 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSR1P21757 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MSR1P21757 AC087499.1-201ENST00000418141 1075 ntBASIC16.2■□□□□ 0.18
MSR1P21757 AC009947.2-201ENST00000444014 672 ntBASIC16.2■□□□□ 0.18
MSR1P21757 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSR1P21757 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.2■□□□□ 0.18
MSR1P21757 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.2■□□□□ 0.18
MSR1P21757 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.2■□□□□ 0.18
MSR1P21757 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
MSR1P21757 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MSR1P21757 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MSR1P21757 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSR1P21757 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSR1P21757 AC135776.1-201ENST00000319817 2481 ntBASIC16.2■□□□□ 0.18
MSR1P21757 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MSR1P21757 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MSR1P21757 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MSR1P21757 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MSR1P21757 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
MSR1P21757 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.19■□□□□ 0.18
MSR1P21757 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.19■□□□□ 0.18
MSR1P21757 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
MSR1P21757 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 AP000523.1-201ENST00000398242 1049 ntBASIC16.19■□□□□ 0.18
MSR1P21757 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.19■□□□□ 0.18
MSR1P21757 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MSR1P21757 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.19■□□□□ 0.18
MSR1P21757 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.19■□□□□ 0.18
MSR1P21757 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.19■□□□□ 0.18
MSR1P21757 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.19■□□□□ 0.18
MSR1P21757 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.19■□□□□ 0.18
MSR1P21757 AC145285.6-201ENST00000604632 637 ntBASIC16.19■□□□□ 0.18
MSR1P21757 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
MSR1P21757 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.19■□□□□ 0.18
MSR1P21757 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
MSR1P21757 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.19■□□□□ 0.18
MSR1P21757 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.19■□□□□ 0.18
MSR1P21757 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSR1P21757 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
MSR1P21757 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
MSR1P21757 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
MSR1P21757 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.19■□□□□ 0.18
MSR1P21757 AC093677.2-201ENST00000600169 1863 ntBASIC16.18■□□□□ 0.18
MSR1P21757 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.18■□□□□ 0.18
MSR1P21757 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSR1P21757 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MSR1P21757 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
MSR1P21757 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
MSR1P21757 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSR1P21757 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSR1P21757 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSR1P21757 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSR1P21757 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSR1P21757 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSR1P21757 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSR1P21757 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
MSR1P21757 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MSR1P21757 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.18■□□□□ 0.18
MSR1P21757 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.18■□□□□ 0.18
MSR1P21757 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.18■□□□□ 0.18
MSR1P21757 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.18■□□□□ 0.18
MSR1P21757 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MSR1P21757 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.18■□□□□ 0.18
MSR1P21757 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.18■□□□□ 0.18
MSR1P21757 NEK4P2-201ENST00000580004 1012 ntBASIC16.18■□□□□ 0.18
MSR1P21757 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.18■□□□□ 0.18
MSR1P21757 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.18■□□□□ 0.18
MSR1P21757 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MSR1P21757 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
MSR1P21757 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms