Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
PF4V1P10720 AC116407.4-201ENST00000623319 1061 ntBASIC14.53□□□□□ -0.08
PF4V1P10720 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PF4V1P10720 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PF4V1P10720 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
PF4V1P10720 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.53□□□□□ -0.08
PF4V1P10720 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PF4V1P10720 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.52□□□□□ -0.08
PF4V1P10720 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.52□□□□□ -0.08
PF4V1P10720 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PF4V1P10720 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PF4V1P10720 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PF4V1P10720 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PF4V1P10720 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PF4V1P10720 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PF4V1P10720 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PF4V1P10720 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PF4V1P10720 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.52□□□□□ -0.08
PF4V1P10720 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PF4V1P10720 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.52□□□□□ -0.08
PF4V1P10720 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PF4V1P10720 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
PF4V1P10720 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PF4V1P10720 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
PF4V1P10720 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PF4V1P10720 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PF4V1P10720 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PF4V1P10720 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PF4V1P10720 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
PF4V1P10720 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.52□□□□□ -0.09
PF4V1P10720 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.52□□□□□ -0.09
PF4V1P10720 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.52□□□□□ -0.09
PF4V1P10720 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
PF4V1P10720 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.52□□□□□ -0.09
PF4V1P10720 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.52□□□□□ -0.09
PF4V1P10720 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.52□□□□□ -0.09
PF4V1P10720 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.52□□□□□ -0.09
PF4V1P10720 AC083849.1-201ENST00000615227 514 ntBASIC14.52□□□□□ -0.09
PF4V1P10720 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.52□□□□□ -0.09
PF4V1P10720 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PF4V1P10720 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PF4V1P10720 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.52□□□□□ -0.09
PF4V1P10720 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PF4V1P10720 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PF4V1P10720 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PF4V1P10720 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PF4V1P10720 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PF4V1P10720 NFIC-211ENST00000641145 8399 ntBASIC14.52□□□□□ -0.09
PF4V1P10720 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PF4V1P10720 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
PF4V1P10720 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.51□□□□□ -0.09
PF4V1P10720 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 KRT8P7-201ENST00000533003 1432 ntBASIC14.51□□□□□ -0.09
PF4V1P10720 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.51□□□□□ -0.09
PF4V1P10720 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PF4V1P10720 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.51□□□□□ -0.09
PF4V1P10720 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.51□□□□□ -0.09
PF4V1P10720 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.51□□□□□ -0.09
PF4V1P10720 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.51□□□□□ -0.09
PF4V1P10720 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
PF4V1P10720 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PF4V1P10720 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PF4V1P10720 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms